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Physicists at the Large Hadron Collider (LHC) rely on detailed simulations of particle collisions to build expectations of what experimental data may look like under different theory modeling assumptions. Petabytes of simulated data are…

High Energy Physics - Experiment · Physics 2018-02-06 Michela Paganini , Luke de Oliveira , Benjamin Nachman

Geometry optimization is an important part of both computational materials and surface science because it is the path to finding ground state atomic structures and reaction pathways. These properties are used in the estimation of…

Materials Science · Physics 2021-07-07 Yilin Yang , Omar A. Jimenez-Negron , John R. Kitchin

In recent years, molecular representation learning has emerged as a key area of focus in various chemical tasks. However, many existing models fail to fully consider the geometric information of molecular structures, resulting in less…

Machine Learning · Computer Science 2023-06-29 Bumju Kwak , Jiwon Park , Taewon Kang , Jeonghee Jo , Byunghan Lee , Sungroh Yoon

Dedicated detector simulations are very important for the success of high energy physics experiments. They not only bring benefits to the optimization of the detectors, but can also improve the precision of the physics results. To design a…

Instrumentation and Detectors · Physics 2018-09-26 Fuyue Wang , Dong Han , Yi Wang , Yancheng Yu , Qiunan Zhang , Baohong Guo , Yuanjing Li

A molecule's geometry, also known as conformation, is one of a molecule's most important properties, determining the reactions it participates in, the bonds it forms, and the interactions it has with other molecules. Conventional…

Machine Learning · Computer Science 2020-01-01 Elman Mansimov , Omar Mahmood , Seokho Kang , Kyunghyun Cho

The precise reconstruction of properties of photons and electrons in modern high energy physics detectors, such as the CMS or Atlas experiments, plays a crucial role in numerous physics results. Conventional geometrical algorithms are used…

High Energy Physics - Experiment · Physics 2023-11-30 Polina Simkina , Fabrice Couderc , Julie Malclès , Mehmet Özgür Sahin

Recent advances in feature learning have shown that self-supervised vision foundation models can capture semantic correspondences but often lack awareness of underlying 3D geometry. GECO addresses this gap by producing geometrically…

Computer Vision and Pattern Recognition · Computer Science 2025-08-04 Regine Hartwig , Dominik Muhle , Riccardo Marin , Daniel Cremers

Statistical models often include thousands of parameters. However, large models decrease the investigator's ability to interpret and communicate the estimated parameters. Reducing the dimensionality of the parameter space in the estimation…

Methodology · Statistics 2022-05-16 Eric Dunipace , Lorenzo Trippa

Particle-based shape modeling (PSM) is a family of approaches that automatically quantifies shape variability across anatomical cohorts by positioning particles (pseudo landmarks) on shape surfaces in a consistent configuration. Recent…

Computer Vision and Pattern Recognition · Computer Science 2025-07-11 Hong Xu , Shireen Y. Elhabian

Machine learning classifiers are probabilistic in nature, and thus inevitably involve uncertainty. Predicting the probability of a specific input to be correct is called uncertainty (or confidence) estimation and is crucial for risk…

Machine Learning · Computer Science 2023-01-11 Gabriella Chouraqui , Liron Cohen , Gil Einziger , Liel Leman

Due to the wide range of timescales that are present in macromolecular systems, hierarchical multiscale strategies are necessary for their computational study. Coarse-graining (CG) allows to establish a link between different system…

High-fidelity physics simulations are powerful tools in the design and optimization of charged particle accelerators. However, the computational burden of these simulations often limits their use in practice for design optimization and…

Accelerator Physics · Physics 2020-04-15 Auralee Edelen , Nicole Neveu , Yannick Huber , Mattias Frey , Christopher Mayes , Andreas Adelmann

Using detailed simulations of calorimeter showers as training data, we investigate the use of deep learning algorithms for the simulation and reconstruction of particles produced in high-energy physics collisions. We train neural networks…

Rapid growth of high-dimensional datasets in fields such as single-cell RNA sequencing and spatial genomics has led to unprecedented opportunities for scientific discovery, but it also presents unique computational and statistical…

Bayesian learning with Gaussian processes demonstrates encouraging regression and classification performances in solving computer vision tasks. However, Bayesian methods on 3D manifold-valued vision data, such as meshes and point clouds,…

Computer Vision and Pattern Recognition · Computer Science 2021-11-02 Yonghui Fan , Yalin Wang

The classical method of determining the atomic structure of complex molecules by analyzing diffraction patterns is currently undergoing drastic developments. Modern techniques for producing extremely bright and coherent X-ray lasers allow a…

Biomolecules · Quantitative Biology 2015-10-12 Tomas Ekeberg , Stefan Engblom , Jing Liu

In machine learning, accurately predicting the probability that a specific input is correct is crucial for risk management. This process, known as uncertainty (or confidence) estimation, is particularly important in mission-critical…

Machine Learning · Computer Science 2023-01-12 Gabriella Chouraqui , Liron Cohen , Gil Einziger , Liel Leman

For responsible decision making in safety-critical settings, machine learning models must effectively detect and process edge-case data. Although existing works show that predictive uncertainty is useful for these tasks, it is not evident…

Machine Learning · Computer Science 2022-08-09 Mark Penrod , Harrison Termotto , Varshini Reddy , Jiayu Yao , Finale Doshi-Velez , Weiwei Pan

Given the necessity of connecting the unconnected, covering blind spots has emerged as a critical task in the next-generation wireless communication network. A direct solution involves obtaining a coverage manifold that visually showcases…

Networking and Internet Architecture · Computer Science 2023-12-12 Ruibo Wang , Washim Uddin Mondal , Mustafa A. Kishk , Vaneet Aggarwal , Mohamed-Slim Alouini

We develop a detector-based framework in which quantum theory and spacetime geometry arise within a common inferential structure. Detector states and a detector kernel assign amplitudes to measurement events, allowing quantum theory to be…

Quantum Physics · Physics 2026-04-14 Marcello Rotondo