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Graph Neural Networks (GNNs) have achieved promising performance in semi-supervised node classification in recent years. However, the problem of insufficient supervision, together with representation collapse, largely limits the performance…

Machine Learning · Computer Science 2025-03-07 Xihong Yang , Yiqi Wang , Yue Liu , Yi Wen , Lingyuan Meng , Sihang Zhou , Xinwang Liu , En Zhu

Recently network embedding has gained increasing attention due to its advantages in facilitating network computation tasks such as link prediction, node classification and node clustering. The objective of network embedding is to represent…

Machine Learning · Computer Science 2022-02-15 Mohammadreza Radmanesh , Hossein Ghorbanzadeh , Ahmad Asgharian Rezaei , Mahdi Jalili , Xinghuo Yu

While Graph Neural Networks (GNNs) have recently become the de facto standard for modeling relational data, they impose a strong assumption on the availability of the node or edge features of the graph. In many real-world applications,…

Machine Learning · Computer Science 2022-05-24 Emanuele Rossi , Henry Kenlay , Maria I. Gorinova , Benjamin Paul Chamberlain , Xiaowen Dong , Michael Bronstein

Federated Learning (FL) enables collaborative training across decentralized clients, but most methods assume aligned feature schemas, an assumption that rarely holds in tabular settings where clients observe only partially overlapping…

Machine Learning · Computer Science 2026-05-18 Imane Hocine , Chaimaa Medjadji , Sylvain Kubler , Gregoire Danoy , Yves Le Traon

Omics data, such as transcriptomics, proteomics, and metabolomics, provide critical insights into disease mechanisms and clinical outcomes. However, their high dimensionality, small sample sizes, and intricate biological networks pose major…

Machine Learning · Computer Science 2026-01-22 Tiantian Yang , Yuxuan Wang , Zhenwei Zhou , Ching-Ti Liu

In the semi-supervised setting where labeled data are largely limited, it remains to be a big challenge for message passing based graph neural networks (GNNs) to learn feature representations for the nodes with the same class label that is…

Machine Learning · Computer Science 2023-05-09 Acong Zhang , Ping Li , Guanrong Chen

Feature extraction and dimension reduction for networks is critical in a wide variety of domains. Efficiently and accurately learning features for multiple graphs has important applications in statistical inference on graphs. We propose a…

Applications · Statistics 2021-06-23 Shangsi Wang , Jesús Arroyo , Joshua T. Vogelstein , Carey E. Priebe

Graph matching can be formalized as a combinatorial optimization problem, where there are corresponding relationships between pairs of nodes that can be represented as edges. This problem becomes challenging when there are potential…

Computer Vision and Pattern Recognition · Computer Science 2023-01-06 Dongdong Chen , Yuxing Dai , Lichi Zhang , Zhihong Zhang

Graph Neural Networks (GNNs) have proven to be powerful in many graph-based applications. However, they fail to generalize well under heterophilic setups, where neighbor nodes have different labels. To address this challenge, we employ a…

Machine Learning · Computer Science 2023-04-13 Yoonhyuk Choi , Jiho Choi , Taewook Ko , Chong-Kwon Kim

Large Foundation Models (LFMs) have demonstrated significant advantages in civil engineering, but they primarily focus on textual and visual data, overlooking the rich semantic, spatial, and topological features in BIM (Building Information…

Machine Learning · Computer Science 2025-09-30 Jin Han , Xin-Zheng Lu , Jia-Rui Lin

Recently, Graph Neural Network (GNN) has achieved remarkable progresses in various real-world tasks on graph data, consisting of node features and the adjacent information between different nodes. High-performance GNN models always depend…

Machine Learning · Computer Science 2022-04-26 Chaochao Chen , Jun Zhou , Longfei Zheng , Huiwen Wu , Lingjuan Lyu , Jia Wu , Bingzhe Wu , Ziqi Liu , Li Wang , Xiaolin Zheng

A large number of real-world networks include multiple types of nodes and edges. Graph Neural Network (GNN) emerged as a deep learning framework to generate node and graph embeddings for downstream machine learning tasks. However, popular…

Machine Learning · Computer Science 2024-11-26 Ziynet Nesibe Kesimoglu , Serdar Bozdag

Network structures in various backgrounds play important roles in social, technological, and biological systems. However, the observable network structures in real cases are often incomplete or unavailable due to measurement errors or…

Machine Learning · Computer Science 2020-01-22 Mengyuan Chen , Jiang Zhang , Zhang Zhang , Lun Du , Qiao Hu , Shuo Wang , Jiaqi Zhu

Counterfactual explanations have emerged as a powerful tool to unveil the opaque decision-making processes of graph neural networks (GNNs). However, existing techniques primarily focus on edge modifications, often overlooking the crucial…

Machine Learning · Computer Science 2025-02-17 Flavio Giorgi , Fabrizio Silvestri , Gabriele Tolomei

Edge features contain important information about graphs. However, current state-of-the-art neural network models designed for graph learning, e.g. graph convolutional networks (GCN) and graph attention networks (GAT), adequately utilize…

Machine Learning · Computer Science 2019-01-29 Liyu Gong , Qiang Cheng

Networks are one of the most valuable data structures for modeling problems in the real world. However, the most recent node embedding strategies have focused on undirected graphs, with limited attention to directed graphs, especially…

Machine Learning · Computer Science 2023-11-27 Xiyang Sun , Fumiyasu Komaki

The task of multi-label image recognition is to predict a set of object labels that present in an image. As objects normally co-occur in an image, it is desirable to model the label dependencies to improve the recognition performance. To…

Computer Vision and Pattern Recognition · Computer Science 2019-04-09 Zhao-Min Chen , Xiu-Shen Wei , Peng Wang , Yanwen Guo

Graph Neural Networks (GNNs) have achieved remarkable performance by taking advantage of graph data. The success of GNN models always depends on rich features and adjacent relationships. However, in practice, such data are usually isolated…

Machine Learning · Computer Science 2020-11-09 Longfei Zheng , Jun Zhou , Chaochao Chen , Bingzhe Wu , Li Wang , Benyu Zhang

Data imputation is a crucial task due to the widespread occurrence of missing data. Many methods adopt a two-step approach: initially crafting a preliminary imputation (the "draft") and then refining it to produce the final missing data…

Machine Learning · Computer Science 2024-07-31 Weiqi Zhang , Guanlue Li , Jianheng Tang , Jia Li , Fugee Tsung

Graph-based methods have been demonstrated as one of the most effective approaches for semi-supervised learning, as they can exploit the connectivity patterns between labeled and unlabeled data samples to improve learning performance.…

Machine Learning · Computer Science 2019-07-01 Qimai Li , Xiao-Ming Wu , Han Liu , Xiaotong Zhang , Zhichao Guan