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One of the first beings affected by changes in the climate are trees, one of our most vital resources. In this study tree species interaction and the response to climate in different ecological environments is observed by applying a joint…

Populations and Evolution · Quantitative Biology 2019-10-14 Hyun Choi , Ali Sadeghian , Sergio Marconi , Ethan White , Daisy Zhe Wang

With the rise of electronic data, particularly Earth observation data, data-based geospatial modelling using machine learning (ML) has gained popularity in environmental research. Accurate geospatial predictions are vital for domain…

Machine Learning · Computer Science 2023-11-21 Diana Koldasbayeva , Polina Tregubova , Mikhail Gasanov , Alexey Zaytsev , Anna Petrovskaia , Evgeny Burnaev

Species distribution models (SDMs) are important statistical tools for ecologists to understand and predict species range. However, standard SDMs do not explicitly incorporate dynamic processes like dispersal. This limitation may lead to…

Populations and Evolution · Quantitative Biology 2021-08-27 Julie Louvrier , Julien Papaïx , Christophe Duchamp , Olivier Gimenez

Deep learning methodologies have been employed in several different fields, with an outstanding success in image recognition applications, such as material quality control, medical imaging, autonomous driving, etc. Deep learning models rely…

Computer Vision and Pattern Recognition · Computer Science 2022-03-11 Saul Calderon-Ramirez , Shengxiang Yang , David Elizondo

The impacts of climate change are felt by most critical systems, such as infrastructure, ecological systems, and power-plants. However, contemporary Earth System Models (ESM) are run at spatial resolutions too coarse for assessing effects…

Computer Vision and Pattern Recognition · Computer Science 2017-03-10 Thomas Vandal , Evan Kodra , Sangram Ganguly , Andrew Michaelis , Ramakrishna Nemani , Auroop R Ganguly

Predictions of biodiversity trajectories under climate change are crucial in order to act effectively in maintaining the diversity of species. In many ecological applications, future predictions are made under various global warming…

Quantitative Methods · Quantitative Biology 2022-07-19 Matthew Davidow , Cory Merow , Judy Che-Castaldo , Toryn Schafer , Marie-Christine Duker , Derek Corcoran , David Matteson

Accurate information on the distribution of vegetation species is used as a proxy for the health of an ecosystem, a currency of international environmental treaties, and a necessary planning tool for forest preservation and rehabilitation,…

Methodology · Statistics 2023-09-20 Henry Scharf , Jonathan Schierbaum , Hana Matsumoto , Tim Assal

Deep Metric Learning (DML) approaches learn to represent inputs to a lower-dimensional latent space such that the distance between representations in this space corresponds with a predefined notion of similarity. This paper investigates how…

Computer Vision and Pattern Recognition · Computer Science 2020-09-09 Niall O' Mahony , Sean Campbell , Anderson Carvalho , Lenka Krpalkova , Gustavo Velasco-Hernandez , Daniel Riordan , Joseph Walsh

This paper concerns the modeling and numerical simulation of the process of speciation. In particular, given conditions for which one or more speciation events within an ecosystem occur, our aim is to develop the necessary modeling and…

Populations and Evolution · Quantitative Biology 2021-10-08 Mats K. Brun , Elyes Ahmed , Jan Martin Nordbotten , Nils Christian Stenseth

In recent years, hyperspectral imaging, also known as imaging spectroscopy, has been paid an increasing interest in geoscience and remote sensing community. Hyperspectral imagery is characterized by very rich spectral information, which…

Computer Vision and Pattern Recognition · Computer Science 2020-07-20 Danfeng Hong , Jing Yao , Xin Wu , Jocelyn Chanussot , Xiao Xiang Zhu

Models of invasive species spread often assume that landscapes are spatially homogeneous; thus simplifying analysis but potentially reducing accuracy. We extend a recently developed partial differential equation model for invasive conifer…

Populations and Evolution · Quantitative Biology 2023-09-14 Elliott Hughes , Miguel Moyers-Gonzalez , Rua Murray , Phillip L. Wilson

Habitats integrate the abiotic conditions, vegetation composition and structure that support biodiversity and sustain nature's contributions to people. Most habitats face mounting pressures from human activities, which requires accurate,…

High resolution geospatial data are challenging because standard geostatistical models based on Gaussian processes are known to not scale to large data sizes. While progress has been made towards methods that can be computed more…

Methodology · Statistics 2020-12-03 Michele Peruzzi , David B. Dunson

Foundation models have made rapid advances in many domains including Earth observation, where Geospatial Foundation Models (GFMs) can help address global challenges such as climate change, agriculture, and disaster response. Previous work…

Machine Learning · Computer Science 2025-01-23 Mirali Purohit , Gedeon Muhawenayo , Esther Rolf , Hannah Kerner

Species distribution models encode spatial patterns of species occurrence making them effective priors for vision-based species classification when location information is available. In this study, we evaluate various SINR (Spatial Implicit…

Computer Vision and Pattern Recognition · Computer Science 2025-08-25 Angela Zhu , Christian Lange , Max Hamilton

Natural ecosystems are characterized by striking diversity of form and functions and yet exhibit deep symmetries emerging across scales of space, time and organizational complexity. Species-area relationships and species-abundance…

Scientific machine learning (SciML) increasingly requires models that capture multimodal conditional uncertainty arising from ill-posed inverse problems, multistability, and chaotic dynamics. While recent work has favored highly expressive…

Machine Learning · Computer Science 2026-02-03 Leonardo Ferreira Guilhoto , Akshat Kaushal , Paris Perdikaris

How do score-based generative models (SBMs) learn the data distribution supported on a low-dimensional manifold? We investigate the score model of a trained SBM through its linear approximations and subspaces spanned by local feature…

Machine Learning · Statistics 2023-11-17 Li Kevin Wenliang , Ben Moran

Multimodal deep learning has been used to predict clinical endpoints and diagnoses from clinical routine data. However, these models suffer from scaling issues: they have to learn pairwise interactions between each piece of information in…

Score-based generative models (SGMs) need to approximate the scores $\nabla \log p_t$ of the intermediate distributions as well as the final distribution $p_T$ of the forward process. The theoretical underpinnings of the effects of these…

Machine Learning · Statistics 2022-10-18 Jakiw Pidstrigach