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The role of the selection pressure and mutation amplitude on the behavior of a single-species population evolving on a two-dimensional lattice, in a periodically changing environment, is studied both analytically and numerically. The…

Populations and Evolution · Quantitative Biology 2009-11-13 Ioana Bena , Michel Droz , Janusz Szwabinski , Andrzej Pekalski

In this paper, we study a single-species population model with pulse toxicant input to a small polluted environment. The intrinsic rate of population is affected by environment and toxin in organisms. The toxin in organisms is influenced by…

Populations and Evolution · Quantitative Biology 2016-09-14 Li Dongmei , Yue Wu , Xu Yajing

This paper investigates the optimal harvesting strategy for a single species living in random environments whose growth is given by a regime-switching diffusion. Harvesting acts as a (stochastic) control on the size of the population. The…

Optimization and Control · Mathematics 2016-08-02 Qingshuo Song , Richard Stockbridge , Chao Zhu

Geographic barriers prevent migration between populations, thereby facilitating speciation through allopatry. However, these barriers can exhibit dynamic behavior in nature, promoting cycles of expansion and contraction of populations. Such…

Populations and Evolution · Quantitative Biology 2024-02-01 Débora Princepe , Simone Czarnobai , Rodrigo A. Caetano , Flavia M. D. Marquitti , Marcus A. M. de Aguiar , Sabrina B. L. Araujo

It is essential to understand the dynamics of epidemics in the presence of coexisting pathogens. There are various phenomenon that can effect the dynamics. In this paper, we formulate a mathematical model using different assumptions to…

Populations and Evolution · Quantitative Biology 2021-11-02 S. Ghersheen , V. Kozlov , U. Wennergren

Population dynamics is constrained by the environment, which needs to obey certain conditions to support population growth. We consider a standard model for the evolution of a single species population density, that includes reproduction,…

Populations and Evolution · Quantitative Biology 2016-10-18 E. H. Colombo , C. Anteneodo

Breaking waves generate a distribution of bubble sizes that evolves over time. Knowledge of how this distribution evolves is of practical importance for maritime and climate studies. The analytical framework developed in Part 1 examined how…

Fluid Dynamics · Physics 2020-12-10 Wai Hong Ronald Chan , Perry L. Johnson , Parviz Moin , Javier Urzay

Which factors govern the evolution of mutation rates and emergence of species? Here, we address this question using a first principles model of life where population dynamics of asexual organisms is coupled to molecular properties and…

Populations and Evolution · Quantitative Biology 2009-11-13 Muyoung Heo , Louis Kang , Eugene I. Shakhnovich

We study the force production dynamics of undulating elastic plates as a model for fish-like inertial swimmers. Using a beam model coupled with Lighthill's large-amplitude elongated-body theory, we explore different localised actuations at…

Fluid Dynamics · Physics 2017-12-25 Miguel Piñeirua , Benjamin Thiria , Ramiro Godoy-Diana

Different evolutionary models are known to make disparate predictions for the success of an invading mutant in some situations. For example, some evolutionary mechanics lead to amplification of selection in structured populations, while…

Populations and Evolution · Quantitative Biology 2020-07-01 Francisco Herrerías-Azcué , Vicente Pérez-Muñuzuri , Tobias Galla

Recruitment is calculated by summing random offspring-numbers entering the population, where the number of summands (i.e. spawning population size) is also a random process. A priori, it is not clear that individual reproductive variability…

Populations and Evolution · Quantitative Biology 2022-02-17 Hiro-Sato Niwa

The fitness of a biological strategy is typically measured by its expected reproductive rate, the first moment of its offspring distribution. However, strategies with high expected rates can also have high probabilities of extinction. A…

Populations and Evolution · Quantitative Biology 2013-05-17 Sterling Sawaya , Steffen Klaere

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

Adaptation and Self-Organizing Systems · Physics 2012-08-31 Andrzej Pekalski , Marcel Ausloos

We analyze the optimal harvesting problem for an ecosystem of species that experience environmental stochasticity. Our work generalizes the current literature significantly by taking into account non-linear interactions between species,…

Probability · Mathematics 2019-08-28 Alexandru Hening , Ky Quan Tran , Tien Trong Phan , George Yin

Dynamic exploration for a predator-prey bio-system of two species with ratio-dependent functional response is carried out, where the capability to predate in both the stages of the predator, the juvenile and the matured, is taken into…

Populations and Evolution · Quantitative Biology 2022-12-27 Debasish Bhattacharjee , Tapasvini Roy , Santanu Acharjee , Tarini Kumar Dutta

Recreational fishing is a highly socio-ecological process. Although recreational fisheries are self-regulating and resilient, changing anthropogenic pressure drives these fisheries to overharvest and collapse. Here, we evaluate the effect…

Populations and Evolution · Quantitative Biology 2021-02-17 Sukanta Sarkar , Arzoo Narang , Sudipta Kumar Sinha , Partha Sharathi Dutta

Demonstrating and quantifying the respective roles of social interactions and external stimuli governing fish dynamics is key to understanding fish spatial distribution. If seminal studies have contributed to our understanding of fish…

Biological Physics · Physics 2015-06-03 Manuela Capello , Marc Soria , Pascal Cotel , Jean-Louis Deneubourg , Laurent Dagorn

Establishing a quantitative connection between the population growth rate and the generation times of single cells is a prerequisite for understanding evolutionary dynamics of microbes. However, existing theories fail to account for the…

Populations and Evolution · Quantitative Biology 2017-09-19 Jie Lin , Ariel Amir

The bit-string model of biological aging is used to simulate the catastrophic senescence of Pacific Salmon. We have shown that reproduction occuring only once and at a fixed age is the only ingredient needed to explain the catastrophic…

adap-org · Physics 2009-10-28 T. J. P. Penna , S. Moss de Oliveira , Dietrich Stauffer

In subdivided populations, migration acts together with selection and genetic drift and determines their evolution. Building up on a recently proposed method, which hinges on the emergence of a time scale separation between local and global…

Populations and Evolution · Quantitative Biology 2015-03-24 Pierangelo Lombardo , Andrea Gambassi , Luca Dall'Asta