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The neural dynamics of the nematode C. elegans are experimentally low-dimensional and correspond to discrete behavioral states, where previous modeling work has found neural proxies for some of these states. Experimental results further…

Neurons and Cognition · Quantitative Biology 2015-09-04 James Kunert , Eli Shlizerman , Andrew Walker , J. Nathan Kutz

This thesis focuses on the applications of mathematical tools and concepts brought from nonequilibrium statistical physics to the modeling of ecological problems. The first part provides a short introduction where the theoretical concepts…

Populations and Evolution · Quantitative Biology 2017-01-12 Ricardo Martinez-Garcia

Recent studies have revealed the complex structure of nerve signals in axons. There is experimental evidence that the propagation of an electrical signal (action potential) is accompanied by mechanical and thermal effects. In this paper,…

Biological Physics · Physics 2020-09-21 Jüri Engelbrecht , Kert Tamm , Tanel Peets

Evolution produces complex and structured networks of interacting components in chemical, biological, and social systems. We describe a simple mathematical model for the evolution of an idealized chemical system to study how a network of…

Adaptation and Self-Organizing Systems · Physics 2014-03-05 Sanjay Jain , Sandeep Krishna

Nested structure, which is non-random, controls cooperation dynamics and biodiversity in plant-animal mutualistic networks. This structural pattern has been explained in a static (non-growth) network models. However, evolutionary processes…

Populations and Evolution · Quantitative Biology 2015-03-19 Kazuhiro Takemoto , Masanori Arita

Dynamic structuring of water is a key player in a large class of processes underlying biochemical and technological developments today, the latter often involving electric fields. However, the anisotropic coupling between the water…

Soft Condensed Matter · Physics 2019-05-29 Andreas Baer , Zoran Miličević , David M. Smith , Ana-Sunčana Smith

A range of systems across the social and natural sciences generate datasets consisting of interactions between two distinct categories of items at various instances in time. Online shopping, for example, generates purchasing events of the…

Social and Information Networks · Computer Science 2024-02-13 Alec Kirkley

Understanding active electrolocation in weakly electric fish remains a challenging issue. In this article we propose a mathematical formulation of this problem, in terms of partial differential equations. This allows us to detail two…

Tissues and Organs · Quantitative Biology 2017-11-01 Habib Ammari , Thomas Boulier , Josselin Garnier , Han Wang

Moir\'e superlattices with long-range periodicity exhibit Hofstadter energy spectra under accessible magnetic fields, enabling the exploration of emergent quantum phenomena through a hierarchy of fractal states. However, higher-order…

Mesoscale and Nanoscale Physics · Physics 2026-01-23 Wenqing Song , Yicheng Mou , Qing Lan , Guorui Zhao , Zejing Guo , Jiaqi Liu , Tuoyu Zhao , Cheng Zhang , Wu Shi

Thanks to recent progress in high-throughput experimental techniques, the datasets of large-scale protein interactions of prototypical multicellular species, the nematode worm Caenorhabditis elegans and the fruit fly Drosophila…

Molecular Networks · Quantitative Biology 2009-11-11 K. -I. Goh , B. Kahng , D. Kim

Powders and grains exhibit unpredictable jamming-to-flow transitions that manifest themselves on geophysical scales in catastrophic slip events such as landslides and earthquakes, and on laboratory/industrial scales in profound processing…

Materials Science · Physics 2013-07-10 Karen E. Daniels , Caroline Bauer , Troy Shinbrot

Evolutionary algorithms (EAs) are universal solvers inspired by principles of natural evolution. In many applications, EAs produce astonishingly good solutions. As they are able to deal with complex optimisation problems, they show great…

Neural and Evolutionary Computing · Computer Science 2024-09-25 Jakob Baumann , Ignaz Rutter , Dirk Sudholt

At low temperatures the interactions between like-oriented steps on a surface are believed to be dominated by elastic repulsions. This belief is based on the results of the classical continuum field theories of elasticity. Electrostatic…

Materials Science · Physics 2019-03-21 Giulia Righi , Anna Franchini , Rita Magri

One of the properties that make ecological systems so unique is the range of complex behavioural patterns that can be exhibited by even the simplest communities with only a few species. Much of this complexity is commonly attributed to…

Populations and Evolution · Quantitative Biology 2022-03-18 James Wilsenach , Pietro Landi , Cang Hui

Bacteria possess diverse mechanisms to regulate their motility in response to environmental and physiological signals, enabling them to navigate complex habitats and adapt their behavior. Among these mechanisms, interspecies recognition…

Populations and Evolution · Quantitative Biology 2025-12-01 Mattia Mattei , David Soriano Paños , Mahantesh Halappanavar , Alex Arenas

The correlated motion of flocks is an instance of global order emerging from local interactions. An essential difference with analogous ferromagnetic systems is that flocks are active: animals move relative to each other, dynamically…

Understanding the interactions between viruses and surfaces or interfaces is important, as they provide the principles underpinning the cleaning and disinfection of contaminated surfaces. Yet, the physics of such interactions is currently…

Soft Condensed Matter · Physics 2022-01-19 C. A. Brackley , A. Lips , A. Morozov , W. C. K. Poon , D. Marenduzzo

Electrospray technology enables external electric fields to steer charged droplets, with potential applications in fuel-air mixing and aerodynamic flow control. This study develops a computational framework that couples a steady OpenFOAM…

Fluid Dynamics · Physics 2025-09-30 Ethan Kahn

Dust impacts on spacecraft are commonly detected by antenna instruments as transient voltage perturbations. The signal waveform is generated by the interaction between the impact-generated plasma cloud and the elements of the…

Space Physics · Physics 2023-04-04 Mitchell M. Shen , Zoltan Sternovsky , Alessandro Garzelli , David M. Malaspina

An active area of research interest is the inference of ecological models of complex microbial communities. Inferring such ecological models entails understanding the interactions between microbes and how they affect each other's growth.…

Applications · Statistics 2022-10-19 William Krinsman