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Teaching Graph Neural Networks (GNNs) to accurately classify nodes under severely noisy labels is an important problem in real-world graph learning applications, but is currently underexplored. Although pairwise training methods have…

Machine Learning · Computer Science 2023-06-06 Xuefeng Du , Tian Bian , Yu Rong , Bo Han , Tongliang Liu , Tingyang Xu , Wenbing Huang , Yixuan Li , Junzhou Huang

One significant challenge of exploiting Graph neural networks (GNNs) in real-life scenarios is that they are always treated as black boxes, therefore leading to the requirement of interpretability. To address this, model-level…

Machine Learning · Computer Science 2025-09-22 Xiao Yue , Guangzhi Qu , Lige Gan

Contrastive learning on graphs aims at extracting distinguishable high-level representations of nodes. In this paper, we theoretically illustrate that the entropy of a dataset can be approximated by maximizing the lower bound of the mutual…

Machine Learning · Computer Science 2023-07-27 Yixuan Ma , Xiaolin Zhang , Peng Zhang , Kun Zhan

As AI models grow more complex, explainability is essential for building trust, yet concept-based counterfactual methods still face a trade-off between expressivity and efficiency. Representing underlying concepts as atomic sets is fast but…

Artificial Intelligence · Computer Science 2026-05-22 Angeliki Dimitriou , Nikolaos Chaidos , Maria Lymperaiou , Giorgos Filandrianos , Giorgos Stamou

Graph Neural Networks achieve remarkable results on problems with structured data but come as black-box predictors. Transferring existing explanation techniques, such as occlusion, fails as even removing a single node or edge can lead to…

Machine Learning · Computer Science 2020-10-27 Lukas Faber , Amin K. Moghaddam , Roger Wattenhofer

Deep neural networks have been well-known for their superb handling of various machine learning and artificial intelligence tasks. However, due to their over-parameterized black-box nature, it is often difficult to understand the prediction…

Machine Learning · Computer Science 2022-07-18 Xuhong Li , Haoyi Xiong , Xingjian Li , Xuanyu Wu , Xiao Zhang , Ji Liu , Jiang Bian , Dejing Dou

Mechanistic Interpretability (MI) promises a path toward fully understanding how neural networks make their predictions. Prior work demonstrates that even when trained to perform simple arithmetic, models can implement a variety of…

Machine Learning · Computer Science 2024-05-28 Ouail Kitouni , Niklas Nolte , Víctor Samuel Pérez-Díaz , Sokratis Trifinopoulos , Mike Williams

Unsupervised graph representation learning aims to distill various graph information into a downstream task-agnostic dense vector embedding. However, existing graph representation learning approaches are designed mainly under the node…

Machine Learning · Computer Science 2022-03-04 You Li , Bei Lin , Binli Luo , Ning Gui

To solve the problem that convolutional neural networks (CNNs) are difficult to process non-grid type relational data like graphs, Kipf et al. proposed a graph convolutional neural network (GCN). The core idea of the GCN is to perform…

Machine Learning · Computer Science 2019-04-17 Shangsheng Xie , Mingming Lu

We propose a novel method for interpreting neural networks, focusing on convolutional neural network-based receiver model. The method identifies which unit or units of the model contain most (or least) information about the channel…

Machine Learning · Computer Science 2025-05-26 Marko Tuononen , Dani Korpi , Ville Hautamäki

Motivation: Molecular interaction networks summarize complex biological processes as graphs, whose structure is informative of biological function at multiple scales. Simultaneously, omics technologies measure the variation or activity of…

Quantitative Methods · Quantitative Biology 2020-12-24 Ramin Hasibi , Tom Michoel

We study the problem of clustering nodes in a dynamic graph, where the connections between nodes and nodes' cluster memberships may change over time, e.g., due to community migration. We first propose a dynamic stochastic block model that…

Machine Learning · Computer Science 2021-06-24 Yuhang Yao , Carlee Joe-Wong

Current graph neural networks (GNNs) that tackle node classification on graphs tend to only focus on nodewise scores and are solely evaluated by nodewise metrics. This limits uncertainty estimation on graphs since nodewise marginals do not…

Machine Learning · Computer Science 2022-10-28 Hans Hao-Hsun Hsu , Yuesong Shen , Daniel Cremers

Comparison and evaluation of graph-based representations of sentence meaning is a challenge because competing representations of the same sentence may have different number of nodes, and it is not obvious which nodes should be compared to…

Computation and Language · Computer Science 2026-03-30 Daniel Zeman , Federica Gamba

Artificial neural networks have long been understood as "black boxes": though we know their computation graphs and learned parameters, the knowledge encoded by these weights and functions they perform are not inherently interpretable. As…

Artificial Intelligence · Computer Science 2024-08-13 Adam Davies , Ashkan Khakzar

Attributed network embedding aims to learn low-dimensional vector representations for nodes in a network, where each node contains rich attributes/features describing node content. Because network topology structure and node attributes…

Social and Information Networks · Computer Science 2018-10-17 Daokun Zhang , Jie Yin , Xingquan Zhu , Chengqi Zhang

Network embedding has proved extremely useful in a variety of network analysis tasks such as node classification, link prediction, and network visualization. Almost all the existing network embedding methods learn to map the node IDs to…

Machine Learning · Computer Science 2019-08-14 Tianshu Lyu , Fei Sun , Peng Jiang , Wenwu Ou , Yan Zhang

Graph representation learning is to learn universal node representations that preserve both node attributes and structural information. The derived node representations can be used to serve various downstream tasks, such as node…

Machine Learning · Computer Science 2020-11-16 Yuxiang Ren , Bo Liu , Chao Huang , Peng Dai , Liefeng Bo , Jiawei Zhang

We present a novel methodology to jointly perform multi-task learning and infer intrinsic relationship among tasks by an interpretable and sparse graph. Unlike existing multi-task learning methodologies, the graph structure is not assumed…

Machine Learning · Computer Science 2020-09-15 Shujian Yu , Francesco Alesiani , Ammar Shaker , Wenzhe Yin

Currently, attention mechanisms have garnered increasing attention in Graph Neural Networks (GNNs), such as Graph Attention Networks (GATs) and Graph Transformers (GTs). It is not only due to the commendable boost in performance they offer…

Machine Learning · Computer Science 2024-10-10 Lijie Hu , Tianhao Huang , Lu Yu , Wanyu Lin , Tianhang Zheng , Di Wang
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