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The lack of interpretability in the field of medical image analysis has significant ethical and legal implications. Existing interpretable methods in this domain encounter several challenges, including dependency on specific models,…

Computer Vision and Pattern Recognition · Computer Science 2024-10-30 Lijie Hu , Songning Lai , Wenshuo Chen , Hongru Xiao , Hongbin Lin , Lu Yu , Jingfeng Zhang , Di Wang

Codification of free-text clinical narratives have long been recognised to be beneficial for secondary uses such as funding, insurance claim processing and research. The current scenario of assigning codes is a manual process which is very…

Computation and Language · Computer Science 2021-07-23 Rajvir Kaur , Jeewani Anupama Ginige , Oliver Obst

We present a new image compression paradigm to achieve ``intelligently coding for machine'' by cleverly leveraging the common sense of Large Multimodal Models (LMMs). We are motivated by the evidence that large language/multimodal models…

Computer Vision and Pattern Recognition · Computer Science 2024-08-19 Jinming Liu , Yuntao Wei , Junyan Lin , Shengyang Zhao , Heming Sun , Zhibo Chen , Wenjun Zeng , Xin Jin

Neural IR architectures, particularly cross-encoders, are highly effective models whose internal mechanisms are mostly unknown. Most works trying to explain their behavior focused on high-level processes (e.g., what in the input influences…

Information Retrieval · Computer Science 2025-07-22 Mathias Vast , Basile Van Cooten , Laure Soulier , Benjamin Piwowarski

In the age of music streaming platforms, the task of automatically tagging music audio has garnered significant attention, driving researchers to devise methods aimed at enhancing performance metrics on standard datasets. Most recent…

Sound · Computer Science 2024-02-26 Vassilis Lyberatos , Spyridon Kantarelis , Edmund Dervakos , Giorgos Stamou

Novel contexts may often arise in complex querying scenarios such as in evidence-based medicine (EBM) involving biomedical literature, that may not explicitly refer to entities or canonical concept forms occurring in any fact- or rule-based…

Computation and Language · Computer Science 2019-11-12 Manirupa Das , Juanxi Li , Eric Fosler-Lussier , Simon Lin , Soheil Moosavinasab , Steve Rust , Yungui Huang , Rajiv Ramnath

Recent methods that integrate spatial layouts with text for document understanding in large language models (LLMs) have shown promising results. A commonly used method is to represent layout information as text tokens and interleave them…

Computer Vision and Pattern Recognition · Computer Science 2025-03-25 Zhaoqing Zhu , Chuwei Luo , Zirui Shao , Feiyu Gao , Hangdi Xing , Qi Zheng , Ji Zhang

The extraction of lung lesion information from clinical and medical imaging reports is crucial for research on and clinical care of lung-related diseases. Large language models (LLMs) can be effective at interpreting unstructured text in…

Computation and Language · Computer Science 2024-11-18 Diya Li , Asim Kadav , Aijing Gao , Rui Li , Richard Bourgon

The integration of Large Language Models (LLMs) into the drug discovery and development field marks a significant paradigm shift, offering novel methodologies for understanding disease mechanisms, facilitating drug discovery, and optimizing…

Quantitative Methods · Quantitative Biology 2024-09-10 Yizhen Zheng , Huan Yee Koh , Maddie Yang , Li Li , Lauren T. May , Geoffrey I. Webb , Shirui Pan , George Church

Despite their success, Large-Language Models (LLMs) still face criticism due to their lack of interpretability. Traditional post-hoc interpretation methods, based on attention and gradient-based analysis, offer limited insights as they only…

Computation and Language · Computer Science 2025-07-17 Francesco De Santis , Philippe Bich , Gabriele Ciravegna , Pietro Barbiero , Danilo Giordano , Tania Cerquitelli

This survey paper delves into the emerging and critical area of symbolic knowledge distillation in Large Language Models (LLMs). As LLMs like Generative Pre-trained Transformer-3 (GPT-3) and Bidirectional Encoder Representations from…

Computation and Language · Computer Science 2024-08-21 Kamal Acharya , Alvaro Velasquez , Houbing Herbert Song

Clinical coding is an administrative process that involves the translation of diagnostic data from episodes of care into a standard code format such as ICD10. It has many critical applications such as billing and aetiology research. The…

Supervised topic models can help clinical researchers find interpretable cooccurence patterns in count data that are relevant for diagnostics. However, standard formulations of supervised Latent Dirichlet Allocation have two problems.…

Machine Learning · Statistics 2016-12-07 Michael C. Hughes , Huseyin Melih Elibol , Thomas McCoy , Roy Perlis , Finale Doshi-Velez

Pretrained language models (PLMs) have made significant strides in various natural language processing tasks. However, the lack of interpretability due to their ``black-box'' nature poses challenges for responsible implementation. Although…

Computation and Language · Computer Science 2023-11-10 Zhen Tan , Lu Cheng , Song Wang , Yuan Bo , Jundong Li , Huan Liu

Pre-trained language models based on masked language modeling (MLM) excel in natural language understanding (NLU) tasks. While fine-tuned MLM-based encoders consistently outperform causal language modeling decoders of comparable size,…

Computation and Language · Computer Science 2024-06-07 David Dukić , Jan Šnajder

Vision-Language Models (VLMs) are powerful tools for processing and understanding text and images. We study the processing of visual tokens in the language model component of LLaVA, a prominent VLM. Our approach focuses on analyzing the…

Computer Vision and Pattern Recognition · Computer Science 2025-04-29 Clement Neo , Luke Ong , Philip Torr , Mor Geva , David Krueger , Fazl Barez

In the realm of predictive analytics, the nuanced domain knowledge of investigators often remains underutilized, confined largely to subjective interpretations and ad hoc decision-making. This paper explores the potential of Large Language…

Machine Learning · Computer Science 2024-05-15 Phoebe Jing , Yijing Gao , Yuanhang Zhang , Xianlong Zeng

Causal language models acquire vast amount of knowledge from general text corpus during pretraining, but the efficiency of knowledge learning is known to be unsatisfactory, especially when learning from knowledge-dense and small-sized…

Artificial Intelligence · Computer Science 2025-03-13 Jian Gao , Xiao Zhang , Ji Wu , Miao Li

Identification of input data points relevant for the classifier (i.e. serve as the support vector) has recently spurred the interest of researchers for both interpretability as well as dataset debugging. This paper presents an in-depth…

Machine Learning · Computer Science 2020-09-30 Dominique Mercier , Shoaib Ahmed Siddiqui , Andreas Dengel , Sheraz Ahmed

Concept Bottleneck Models (CBMs) are a prominent framework for interpretable AI that map learned visual features to a set of meaningful concepts for task-specific downstream predictions. Their sequential structure enhances transparency by…

Computer Vision and Pattern Recognition · Computer Science 2026-03-11 Mohamed Harmanani , Bining Long , Zhuoxin Guo , Paul F. R. Wilson , Amirhossein Sabour , Minh Nguyen Nhat To , Gabor Fichtinger , Purang Abolmaesumi , Parvin Mousavi
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