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A parametric approach is developed to the method of S-tree diagrams and its generalization for investigation of the hierarchical substructure of $N$-body nonlinearly interacting systems (e.g., clusters of galaxies). The introduction of a…

Astrophysics · Physics 2007-05-23 Karen M. Bekarian , Anahit A. Melkonian

A widely used approach for extracting information from gene expression data employ the construction of a gene co-expression network and the subsequent application of algorithms that discover network structure. In particular, a common goal…

Genomics · Quantitative Biology 2024-08-20 Niloofar Aghaieabiane , Ioannis Koutis

Methods that generate networks sharing a given degree distribution and global clustering can induce changes in structural properties other than that controlled for. Diversity in structural properties, in turn, can affect the outcomes of…

Social and Information Networks · Computer Science 2018-09-18 Peter Overbury , István Z. Kiss , Luc Berthouze

Gait recognition is an appealing biometric modality which aims to identify individuals based on the way they walk. Deep learning has reshaped the research landscape in this area since 2015 through the ability to automatically learn…

Computer Vision and Pattern Recognition · Computer Science 2022-02-15 Alireza Sepas-Moghaddam , Ali Etemad

Decision trees are a commonly used class of machine learning models valued for their interpretability and versatility, capable of both classification and regression. We propose ZTree, a novel decision tree learning framework that replaces…

Machine Learning · Computer Science 2025-09-17 Eric Cheng , Jie Cheng

This paper describes the systematic application of local topological methods for detecting interfaces and related anomalies in complicated high-dimensional data. By examining the topology of small regions around each point, one can…

Algebraic Topology · Mathematics 2022-05-25 Bernadette J Stolz , Jared Tanner , Heather A Harrington , Vidit Nanda

We present Collaborative Trees, a novel tree model designed for regression prediction, along with its bagging version, which aims to analyze complex statistical associations between features and uncover potential patterns inherent in the…

Methodology · Statistics 2024-05-21 Chien-Ming Chi

Nowadays, various stakeholders involved in the analysis of electric power distribution grids face difficulties in the data acquisition related to the grid topology and parameters of grid assets. To mitigate the problem and possibly…

Systems and Control · Electrical Eng. & Systems 2024-08-27 Chandra Sekhar Charan Dande , Luca Mattorolo , Joel da Silva Andre , Lydia Lavecchia , Nikolaos Efkarpidis , Damiano Toffanin

In this paper we present a novel iterative multiphase clustering technique for efficiently clustering high dimensional data points. For this purpose we implement clustering feature (CF) tree on a real data set and a Gaussian density…

Machine Learning · Computer Science 2014-11-13 Chandrima Sarkar , Atanu Roy

Matching is a popular approach in causal inference to estimate treatment effects by pairing treated and control units that are most similar in terms of their covariate information. However, classic matching methods completely ignore the…

Machine Learning · Computer Science 2025-05-07 Melanie F. Pradier , Javier González

A generative modeling framework is proposed that combines diffusion models and manifold learning to efficiently sample data densities on manifolds. The approach utilizes Diffusion Maps to uncover possible low-dimensional underlying (latent)…

Machine Learning · Computer Science 2025-04-22 Dimitris G. Giovanis , Ellis Crabtree , Roger G. Ghanem , Ioannis G. Kevrekidis

A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phylogenetics is to combine such trees into larger trees, called…

Artificial Intelligence · Computer Science 2014-01-16 Neil C. A. Moore , Patrick Prosser

Signals analysis for cytometry remains a challenging task that has a significant impact on uncertainty. Conventional cytometers assume that individual measurements are well characterized by simple properties such as the signal area, width,…

Symmetry is fundamental to understanding physical systems and can improve performance and sample efficiency in machine learning. Both pursuits require knowledge of the underlying symmetries in data, yet discovering these symmetries…

Artificial Intelligence · Computer Science 2026-03-03 Yuxuan Chen , Jung Yeon Park , Floor Eijkelboom , Jianke Yang , Jan-Willem van de Meent , Lawson L. S. Wong , Robin Walters

Recent breakthroughs in cancer research have come via the up-and-coming field of pathway analysis. By applying statistical methods to prior known gene and protein regulatory information, pathway analysis provides a meaningful way to…

Genomics · Quantitative Biology 2017-10-11 Yue Zhao

We propose a novel method for multiple clustering that assumes a co-clustering structure (partitions in both rows and columns of the data matrix) in each view. The new method is applicable to high-dimensional data. It is based on a…

Deep learning has achieved spectacular performance in image and speech recognition and synthesis. It outperforms other machine learning algorithms in problems where large amounts of data are available. In the area of measurement technology,…

Quantitative Methods · Quantitative Biology 2019-08-20 Yueqin Li , Ata Mahjoubfar , Claire Lifan Chen , Kayvan Reza Niazi , Li Pei , Bahram Jalali

The automated analysis of flow cytometry measurements is an active research field. We introduce a new algorithm, referred to as CytOpT, using regularized optimal transport to directly estimate the different cell population proportions from…

Applications · Statistics 2022-07-01 Paul Freulon , Jérémie Bigot , Boris P. Hejblum

Gene expression datasets offer insights into gene regulation mechanisms, biochemical pathways, and cellular functions. Additionally, comparing gene expression profiles between disease and control patients can deepen the understanding of…

Machine Learning · Computer Science 2025-03-27 Rita T. Sousa , Heiko Paulheim

Gait recognition aims to identify a person at a distance, serving as a promising solution for long-distance and less-cooperation pedestrian recognition. Recently, significant advancements in gait recognition have achieved inspiring success…

Computer Vision and Pattern Recognition · Computer Science 2023-08-08 Chuanfu Shen , Shiqi Yu , Jilong Wang , George Q. Huang , Liang Wang