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Supervised deep learning offers great promise to automate analysis of medical images from segmentation to diagnosis. However, their performance highly relies on the quality and quantity of the data annotation. Meanwhile, curating large…

Image and Video Processing · Electrical Eng. & Systems 2023-09-19 Yuyue Zhou , Jessica Knight , Banafshe Felfeliyan , Christopher Keen , Abhilash Rakkunedeth Hareendranathan , Jacob L. Jaremko

The field of self-supervised learning (SSL) for 3D medical images lacks consistency and standardization. While many methods have been developed, it is impossible to identify the current state-of-the-art, due to i) varying and small…

Computer Vision and Pattern Recognition · Computer Science 2025-04-21 Tassilo Wald , Constantin Ulrich , Jonathan Suprijadi , Sebastian Ziegler , Michal Nohel , Robin Peretzke , Gregor Köhler , Klaus H. Maier-Hein

Self-supervised learning (SSL) has led to important breakthroughs in computer vision by allowing learning from large amounts of unlabeled data. As such, it might have a pivotal role to play in biomedicine where annotating data requires a…

Computer Vision and Pattern Recognition · Computer Science 2024-03-14 Roy Hirsch , Mathilde Caron , Regev Cohen , Amir Livne , Ron Shapiro , Tomer Golany , Roman Goldenberg , Daniel Freedman , Ehud Rivlin

The success of self-supervised learning (SSL) has mostly been attributed to the availability of unlabeled yet large-scale datasets. However, in a specialized domain such as medical imaging which is a lot different from natural images, the…

Computer Vision and Pattern Recognition · Computer Science 2023-06-30 Soumitri Chattopadhyay , Soham Ganguly , Sreejit Chaudhury , Sayan Nag , Samiran Chattopadhyay

Deep learning has become a valuable tool for the automation of certain medical image segmentation tasks, significantly relieving the workload of medical specialists. Some of these tasks require segmentation to be performed on a subset of…

Image and Video Processing · Electrical Eng. & Systems 2024-02-06 José Morano , Guilherme Aresta , Dmitrii Lachinov , Julia Mai , Ursula Schmidt-Erfurth , Hrvoje Bogunović

Self-supervised learning (SSL) has emerged as a promising paradigm in medical imaging, addressing the chronic challenge of limited labeled data in healthcare settings. While SSL has shown impressive results, existing studies in the medical…

Computer Vision and Pattern Recognition · Computer Science 2025-07-29 Valay Bundele , Karahan Sarıtaş , Bora Kargi , Oğuz Ata Çal , Kıvanç Tezören , Zohreh Ghaderi , Hendrik Lensch

MatSSL is a streamlined self-supervised learning (SSL) architecture that employs Gated Feature Fusion at each stage of the backbone to integrate multi-level representations effectively. Current micrograph analysis of metallic materials…

Computer Vision and Pattern Recognition · Computer Science 2025-07-29 Hoang Hai Nam Nguyen , Phan Nguyen Duc Hieu , Ho Won Lee

Self-supervised learning (SSL) has achieved remarkable performance in various medical imaging tasks by dint of priors from massive unlabelled data. However, regarding a specific downstream task, there is still a lack of an instruction book…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Chuyan Zhang , Yun Gu

Semi-supervised learning (SSL) has attracted much attention since it reduces the expensive costs of collecting adequate well-labeled training data, especially for deep learning methods. However, traditional SSL is built upon an assumption…

Computer Vision and Pattern Recognition · Computer Science 2024-07-03 Lie Ju , Yicheng Wu , Wei Feng , Zhen Yu , Lin Wang , Zhuoting Zhu , Zongyuan Ge

Training deep learning models for three-dimensional (3D) medical imaging, such as Computed Tomography (CT), is fundamentally challenged by the scarcity of labeled data. While pre-training on natural images is common, it results in a…

Recently, self-supervised learning (SSL) methods have been used in pre-training the segmentation models for 2D and 3D medical images. Most of these methods are based on reconstruction, contrastive learning and consistency regularization.…

Computer Vision and Pattern Recognition · Computer Science 2024-06-25 Haofeng Li , Yiming Ouyang , Xiang Wan

Supervised learning demands large amounts of precisely annotated data to achieve promising results. Such data curation is labor-intensive and imposes significant overhead regarding time and costs. Self-supervised learning (SSL) partially…

Computer Vision and Pattern Recognition · Computer Science 2025-05-21 Thangarajah Akilan , Nusrat Jahan , Wandong Zhang

The Vision Transformer (ViT) has demonstrated remarkable performance in Self-Supervised Learning (SSL) for 3D medical image analysis. Masked AutoEncoder (MAE) for feature pre-training can further unleash the potential of ViT on various…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Jiaxin Zhuang , Linshan Wu , Qiong Wang , Peng Fei , Varut Vardhanabhuti , Lin Luo , Hao Chen

Self-supervised learning (SSL) enables learning useful inductive biases through utilizing pretext tasks that require no labels. The unlabeled nature of SSL makes it especially important for whole slide histopathological images (WSIs), where…

Computer Vision and Pattern Recognition · Computer Science 2022-11-15 Wisdom Oluchi Ikezogwo , Mehmet Saygin Seyfioglu , Linda Shapiro

Collecting large-scale medical datasets with fully annotated samples for training of deep networks is prohibitively expensive, especially for 3D volume data. Recent breakthroughs in self-supervised learning (SSL) offer the ability to…

Computer Vision and Pattern Recognition · Computer Science 2022-12-06 Duy M. H. Nguyen , Hoang Nguyen , Mai T. N. Truong , Tri Cao , Binh T. Nguyen , Nhat Ho , Paul Swoboda , Shadi Albarqouni , Pengtao Xie , Daniel Sonntag

The process of annotating relevant data in the field of digital microscopy can be both time-consuming and especially expensive due to the required technical skills and human-expert knowledge. Consequently, large amounts of microscopic image…

Computer Vision and Pattern Recognition · Computer Science 2023-11-21 Asmaa Haja , Eric Brouwer , Lambert Schomaker

Medical instrument segmentation in 3D ultrasound is essential for image-guided intervention. However, to train a successful deep neural network for instrument segmentation, a large number of labeled images are required, which is expensive…

Computer Vision and Pattern Recognition · Computer Science 2021-08-03 Hongxu Yang , Caifeng Shan , R. Arthur Bouwman , Lukas R. C. Dekker , Alexander F. Kolen , Peter H. N. de With

Large-scale volumetric medical images with annotation are rare, costly, and time prohibitive to acquire. Self-supervised learning (SSL) offers a promising pre-training and feature extraction solution for many downstream tasks, as it only…

Computer Vision and Pattern Recognition · Computer Science 2023-03-16 Ke Yu , Li Sun , Junxiang Chen , Max Reynolds , Tigmanshu Chaudhary , Kayhan Batmanghelich

A major limitation in applying deep learning to artificial intelligence (AI) systems is the scarcity of high-quality curated datasets. We investigate strong augmentation based self-supervised learning (SSL) techniques to address this…

Image and Video Processing · Electrical Eng. & Systems 2022-03-18 John D. Miller , Vignesh A. Arasu , Albert X. Pu , Laurie R. Margolies , Weiva Sieh , Li Shen

Vision transformers, with their ability to more efficiently model long-range context, have demonstrated impressive accuracy gains in several computer vision and medical image analysis tasks including segmentation. However, such methods need…

Image and Video Processing · Electrical Eng. & Systems 2022-09-27 Jue Jiang , Neelam Tyagi , Kathryn Tringale , Christopher Crane , Harini Veeraraghavan
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