Related papers: On merge trees with a given homological sequence
It is shown that a surjective monotone map $X\to Y$ between finite $T_0$-spaces induces a surjective map on homology. As such a map turns out to be a sequence of edge contractions in the Hasse diagram of $X$, followed by a homeomorphism,…
Topologically constrained genome-like polymers often double-fold into tree-like configurations, which can be modelled on the level of folded (ring) polymers or on the level of the underlying random trees. For both descriptions, we have…
Combinatorial trees can be used to represent genealogies of asexual individuals. These individuals can be endowed with birth and death times, to obtain a so-called `chronological tree'. In this work, we are interested in the continuum…
The interleaving distance is a key tool for comparing merge trees, which provide topological summaries of scalar functions. In this work, we define an average merge tree for a pair of merge trees using the interleaving distance. Since such…
In this paper, we present a flexible and probabilistic framework for tracking topological features in time-varying scalar fields using merge trees and partial optimal transport. Merge trees are topological descriptors that record the…
We study transformations between discrete Morse functions on a finite simplicial complex via birth-death transitions--elementary chain maps between discrete Morse complexes that either create or cancel pairs of critical simplices. We prove…
A tree $T$ is said to be homogeneous if it is uniquely rooted and there exists an integer $b\meg 2$, called the branching number of $T$, such that every $t\in T$ has exactly $b$ immediate successors. A vector homogeneous tree $\mathbf{T}$…
A matching complex of a simple graph $G$ is a simplicial complex with faces given by the matchings of $G$. The topology of matching complexes is mysterious; there are few graphs for which the homotopy type is known. Marietti and Testa…
We investigate properties of the set of discrete Morse functions on a simplicial complex as defined by Forman. It is not difficult to see that the pairings of discrete Morse functions of a finite simplicial complex again form a simplicial…
Topological structures such as the merge tree provide an abstract and succinct representation of scalar fields. They facilitate effective visualization and interactive exploration of feature-rich data. A merge tree captures the topology of…
Given two discrete Morse functions on a simplicial complex, we introduce the {\em connectedness homomorphism} between the corresponding discrete Morse complexes. This concept leads to a novel framework for studying the connectedness in…
In this work we define a metric structure to compare functions defined on different merge trees. The metric introduced possesses some stability properties, which we illustrate within a standard topological data analysis (TDA) framework, and…
Feature tracking in time-varying scalar fields is a fundamental task in scientific computing. Topological descriptors, which summarize important features of data, have proved to be viable tools to facilitate this task. The merge tree is a…
The combination of persistent homology and discrete Morse theory has proven very effective in visualizing and analyzing big and heterogeneous data. Indeed, topology provides computable and coarse summaries of data independently from…
Termination property of functions is an important issue in computability theory. In this paper, we show that repeated iterations of a function can induce an order amongst the elements of its domain set. Hasse diagram of the poset, thus…
Merge trees are a topological descriptor of a filtered space that enriches the degree zero barcode with its merge structure. The space of merge trees comes equipped with an interleaving distance $d_I$, which prompts a naive question: is the…
A cluster tree provides a highly-interpretable summary of a density function by representing the hierarchy of its high-density clusters. It is estimated using the empirical tree, which is the cluster tree constructed from a density…
We define decision trees for monotone functions on a simplicial complex. We define homology decidability of monotone functions, and show that various monotone functions related to semimatroids are homology decidable. Homology decidability…
In this paper we present a new approach to computing homology (with field coefficients) and persistent homology. We use concepts from discrete Morse theory, to provide an algorithm which can be expressed solely in terms of simple graph…
Topological data analysis can reveal higher-order structure beyond pairwise connections between vertices in complex networks. We present a new method based on discrete Morse theory to study topological properties of unweighted and…