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Brain MR image segmentation is a key task in neuroimaging studies. It is commonly conducted using standard computational tools, such as FSL, SPM, multi-atlas segmentation etc, which are often registration-based and suffer from expensive…

Image and Video Processing · Electrical Eng. & Systems 2019-08-29 Chengliang Dai , Yuanhan Mo , Elsa Angelini , Yike Guo , Wenjia Bai

Neuroscientists are actively pursuing high-precision maps, or graphs, consisting of networks of neurons and connecting synapses in mammalian and non-mammalian brains. Such graphs, when coupled with physiological and behavioral data, are…

Fine-grained annotations---e.g. dense image labels, image segmentation and text tagging---are useful in many ML applications but they are labor-intensive to generate. Moreover there are often systematic, structured errors in these…

Machine Learning · Computer Science 2020-03-26 Abubakar Abid , James Zou

Harnessing the power of deep neural networks in the medical imaging domain is challenging due to the difficulties in acquiring large annotated datasets, especially for rare diseases, which involve high costs, time, and effort for…

Image and Video Processing · Electrical Eng. & Systems 2023-08-22 Md Mahfuzur Rahman Siddiquee , Jay Shah , Teresa Wu , Catherine Chong , Todd J. Schwedt , Gina Dumkrieger , Simona Nikolova , Baoxin Li

This paper introduces FRAME (Fine-grained Recognition of Art-historical Metadata and Entities), a manually annotated dataset of art-historical image descriptions for Named Entity Recognition (NER) and Relation Extraction (RE). Descriptions…

Computation and Language · Computer Science 2026-02-24 Stefanie Schneider , Miriam Göldl , Julian Stalter , Ricarda Vollmer

Volumetric brain reconstructions provide an unprecedented opportunity to gain insights into the complex connectivity patterns of neurons in an increasing number of organisms. Here, we model and quantify the complexity of the resulting…

Neurons and Cognition · Quantitative Biology 2024-05-13 Anastasiya Salova , István A. Kovács

Extracellular, large scale in vivo recording of neural activity is mandatory for elucidating the interaction of neurons within large neural networks at the level of their single unit activity. Technological achievements in MEMS-based…

Neurons and Cognition · Quantitative Biology 2017-07-03 Patrick Ruther , Oliver Paul

Developing robust and versatile deep-learning models is essential for enhancing diagnostic accuracy and guiding clinical interventions in medical imaging, but it requires a large amount of annotated data. The advancement of deep learning…

Computer Vision and Pattern Recognition · Computer Science 2025-03-14 Nahid Ul Islam , DongAo Ma , Jiaxuan Pang , Shivasakthi Senthil Velan , Michael Gotway , Jianming Liang

Training deep neural networks reliably requires access to large-scale datasets. However, obtaining such datasets can be challenging, especially in the context of neuroimaging analysis tasks, where the cost associated with image acquisition…

Accurately modeling effective connectivity (EC) is critical for understanding how the brain processes and integrates sensory information. Yet, it remains a formidable challenge due to complex neural dynamics and noisy measurements such as…

Neurons and Cognition · Quantitative Biology 2025-03-19 Deepa Tilwani , Christian O'Reilly

Identifying cell types and subtypes in routine histopathology is fundamental for understanding disease. Existing tile-based models capture nuclear detail but miss the broader tissue context that influences cell identity. Current human…

Computer Vision and Pattern Recognition · Computer Science 2025-11-20 Yinuo Xu , Yan Cui , Mingyao Li , Zhi Huang

Brain connectomes offer detailed maps of neural connections within the brain. Recent studies have proposed novel connectome graph datasets and attempted to improve connectome classification by using graph deep learning. With recent advances…

Machine Learning · Computer Science 2025-03-21 Jose Lara-Rangel , Clare Heinbaugh

Machine learning has been widely adopted for medical image analysis in recent years given its promising performance in image segmentation and classification tasks. The success of machine learning, in particular supervised learning, depends…

Computer Vision and Pattern Recognition · Computer Science 2022-06-03 Chengliang Dai , Shuo Wang , Yuanhan Mo , Elsa Angelini , Yike Guo , Wenjia Bai

Upgrades to advanced scientific user facilities such as next-generation x-ray light sources, nanoscience centers, and neutron facilities are revolutionizing our understanding of materials across the spectrum of the physical sciences, from…

Computational Engineering, Finance, and Science · Computer Science 2023-12-05 Michael H. Prince , Henry Chan , Aikaterini Vriza , Tao Zhou , Varuni K. Sastry , Matthew T. Dearing , Ross J. Harder , Rama K. Vasudevan , Mathew J. Cherukara

Understanding and reasoning over academic handwritten notes remains a challenge in document AI, particularly for mathematical equations, diagrams, and scientific notations. Existing visual question answering (VQA) benchmarks focus on…

Computer Vision and Pattern Recognition · Computer Science 2025-04-15 Aniket Pal , Sanket Biswas , Alloy Das , Ayush Lodh , Priyanka Banerjee , Soumitri Chattopadhyay , Dimosthenis Karatzas , Josep Llados , C. V. Jawahar

The correct functioning of photovoltaic (PV) cells is critical to ensuring the optimal performance of a solar plant. Anomaly detection techniques for PV cells can result in significant cost savings in operation and maintenance (O&M). Recent…

Computer Vision and Pattern Recognition · Computer Science 2022-12-16 Urtzi Otamendi , Inigo Martinez , Igor G. Olaizola , Marco Quartulli

Large Language Models (LLMs) hold immense potential for revolutionizing Customer Experience Management (CXM), particularly in contact center operations. However, evaluating their practical utility in complex operational environments is…

Machine Learning · Computer Science 2025-05-20 Raghav Garg , Kapil Sharma , Karan Gupta

Automated analysis of endoscopic imagery is a critical yet underdeveloped component of ENT (ear, nose, and throat) care, hindered by variability in devices and operators, subtle and localized findings, and fine-grained distinctions such as…

Computer Vision and Pattern Recognition · Computer Science 2025-08-08 Trong-Thuan Nguyen , Viet-Tham Huynh , Thao Thi Phuong Dao , Ha Nguyen Thi , Tien To Vu Thuy , Uyen Hanh Tran , Tam V. Nguyen , Thanh Dinh Le , Minh-Triet Tran

Obtaining large-scale medical data, annotated or unannotated, is challenging due to stringent privacy regulations and data protection policies. In addition, annotating medical images requires that domain experts manually delineate…

Computer Vision and Pattern Recognition · Computer Science 2025-05-16 Tushar Kataria , Shireen Y. Elhabian
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