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We study how the topology of feature embedding space changes as it passes through the layers of a well-trained deep neural network (DNN) through Betti numbers. Motivated by existing studies using simplicial complexes on shallow fully…

Machine Learning · Computer Science 2023-11-10 Suryaka Suresh , Bishshoy Das , Vinayak Abrol , Sumantra Dutta Roy

Persistence modules are representations of products of totally ordered sets in the category of vector spaces. They appear naturally in the representation theory of algebras, but in recent years they have also found applications in other…

Algebraic Topology · Mathematics 2024-11-04 Steve Oudot

The bigraded Betti numbers b^{-i,2j}(P) of a simple polytope P are the dimensions of the bigraded components of the Tor groups of the face ring k[P]. The numbers b^{-i,2j}(P) reflect the combinatorial structure of P as well as the topology…

Algebraic Topology · Mathematics 2017-11-15 Ivan Limonchenko

We develop some aspects of the homological algebra of persistence modules, in both the one-parameter and multi-parameter settings, considered as either sheaves or graded modules. The two theories are different. We consider the graded module…

Algebraic Topology · Mathematics 2022-05-09 Peter Bubenik , Nikola Milicevic

Let $\Lambda$ be a basic finite dimensional algebra over an algebraically closed field, presented as a path algebra modulo relations; further, assume that $\Lambda$ is graded by lengths of paths. The paper addresses the classifiability, via…

Representation Theory · Mathematics 2014-07-11 E. Babson , B. Huisgen-Zimmermann , R. Thomas

The homological information about a filtered simplicial complex over the poset of positive real numbers is often presented by a barcode which depicts the evolution of the associated Betti numbers. However, there is a wonderfully complex…

Algebraic Topology · Mathematics 2022-09-05 İsmail Güzel , Atabey Kaygun

Long lived topological features are distinguished from short lived ones (considered as topological noise) in simplicial complexes constructed from complex networks. A new topological invariant, persistent homology, is determined and…

Mathematical Physics · Physics 2009-11-13 Danijela Horak , Slobodan Maletic , Milan Rajkovic

Persistent homology is a fundamental tool in Topological Data Analysis. The associated algebraic structure is the persistence module, a sequence of vector spaces connected by linear maps. Persistence modules admit a complete and…

Algebraic Topology · Mathematics 2026-02-13 R. Gonzalez-Diaz , M. Soriano-Trigueros , A. Torras-Casas

The focus of this paper is the study of the moduli space of representations of fundamental groupoids of surfaces $\Sigma$ with boundaries with values in $G:=GL_n(\mathbb C)$. In absence of marked points on the boundary, this moduli space is…

Algebraic Geometry · Mathematics 2026-03-20 Benedetta Facciotti , Marta Mazzocco , Nikita Nikolaev

Persistent homology is one of the most active branches of Computational Algebraic Topology with applications in several contexts such as optical character recognition or analysis of point cloud data. In this paper, we report on the formal…

Logic in Computer Science · Computer Science 2012-09-11 Jónathan Heras , Thierry Coquand , Anders Mörtberg , Vincent Siles

A theory of modules over posets is developed to define computationally feasible, topologically interpretable data structures, in terms of birth and death of homology classes, for persistent homology with multiple real parameters. To replace…

Algebraic Topology · Mathematics 2020-08-13 Ezra Miller

Biomolecular structure comparison not only reveals evolutionary relationships, but also sheds light on biological functional properties. However, traditional definitions of structure or sequence similarity always involve superposition or…

Quantitative Methods · Quantitative Biology 2017-07-13 Kelin Xia

Comparison between multidimensional persistent Betti numbers is often based on the multidimensional matching distance. While this metric is rather simple to define and compute by considering a suitable family of filtering functions…

Computational Geometry · Computer Science 2016-03-15 Andrea Cerri , Marc Ethier , Patrizio Frosini

Topological data analysis can extract effective information from higher-dimensional data. Its mathematical basis is persistent homology. The persistent homology can calculate topological features at different spatiotemporal scales of the…

Algebraic Topology · Mathematics 2023-09-29 Dinghua Shi , Zhifeng Chen , Chuang Ma , Guanrong Chen

Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…

Computational Geometry · Computer Science 2013-10-03 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We describe and analyze an algorithm for computing the homology (Betti numbers and torsion coefficients) of closed semialgebraic sets given by Boolean formulas without negations over lax polynomial inequalities. The algorithm works in weak…

Computational Geometry · Computer Science 2020-12-22 Peter Bürgisser , Felipe Cucker , Josué Tonelli-Cueto

This paper considers an important inverse problem in topological data analysis (TDA): How many different barcodes produce the same Betti curve? Equivalently, given a function $\beta\colon [n]=\{1<\cdots< n\} \to \mathbb{Z}_{\geq 0}$, how…

Algebraic Topology · Mathematics 2026-02-10 Henry Ashley , Håvard Bakke Bjerkevik , Justin Curry , Riley Decker , Robert Green

Persistent homology is a powerful mathematical tool that summarizes useful information about the shape of data allowing one to detect persistent topological features while one adjusts the resolution. However, the computation of such…

Quantum Physics · Physics 2022-03-01 Bernardo Ameneyro , Vasileios Maroulas , George Siopsis

Time-series of persistence diagrams, known as vineyards, have shown to be useful in diverse applications. A natural algebraic version of vineyards is a time series of persistence modules equipped with interleaving maps between the…

Representation Theory · Mathematics 2023-07-13 Katharine Turner

Persistent Topology studies topological features of shapes by analyzing the lower level sets of suitable functions, called filtering functions, and encoding the arising information in a parameterized version of the Betti numbers, i.e. the…

Algebraic Topology · Mathematics 2010-05-05 Andrea Cerri , Patrizio Frosini