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Systems that answer questions by reviewing the scientific literature are becoming increasingly feasible. To draw reliable conclusions, these systems should take into account the quality of available evidence from different studies, placing…

Computation and Language · Computer Science 2025-09-23 Jianyou Wang , Weili Cao , Longtian Bao , Youze Zheng , Gil Pasternak , Kaicheng Wang , Xiaoyue Wang , Ramamohan Paturi , Leon Bergen

Deep learning has been widely used in source code classification tasks, such as code classification according to their functionalities, code authorship attribution, and vulnerability detection. Unfortunately, the black-box nature of deep…

Software Engineering · Computer Science 2023-09-20 Zhen Li , Ruqian Zhang , Deqing Zou , Ning Wang , Yating Li , Shouhuai Xu , Chen Chen , Hai Jin

We present ROBOTO2, an open-source, web-based platform for large language model (LLM)-assisted risk of bias (ROB) assessment of clinical trials. ROBOTO2 streamlines the traditionally labor-intensive ROB v2 (ROB2) annotation process via an…

Computation and Language · Computer Science 2025-11-06 Anthony Hevia , Sanjana Chintalapati , Veronica Ka Wai Lai , Thanh Tam Nguyen , Wai-Tat Wong , Terry Klassen , Lucy Lu Wang

With the successful application of deep learning models in many real-world tasks, the model robustness becomes more and more critical. Often, we evaluate the robustness of the deep models by attacking them with purposely generated…

Machine Learning · Computer Science 2020-12-21 Jinyin Chen , Zhen Wang , Haibin Zheng , Jun Xiao , Zhaoyan Ming

Reading comprehension is one of the crucial tasks for furthering research in natural language understanding. A lot of diverse reading comprehension datasets have recently been introduced to study various phenomena in natural language,…

Computation and Language · Computer Science 2020-01-01 Dheeru Dua , Ananth Gottumukkala , Alon Talmor , Sameer Singh , Matt Gardner

Simulation-Based Inference (SBI) is an approach to statistical inference where simulations from an assumed model are used to construct estimators and confidence sets. SBI is often used when the likelihood is intractable and to construct…

Methodology · Statistics 2025-08-05 Lorenzo Tomaselli , Valérie Ventura , Larry Wasserman

We consider the problem of inferring the values of an arbitrary set of variables (e.g., risk of diseases) given other observed variables (e.g., symptoms and diagnosed diseases) and high-dimensional signals (e.g., MRI images or EEG). This is…

Machine Learning · Statistics 2019-02-07 Hao Wang , Chengzhi Mao , Hao He , Mingmin Zhao , Tommi S. Jaakkola , Dina Katabi

Interpretability is crucial to enhance trust in machine learning models for medical diagnostics. However, most state-of-the-art image classifiers based on neural networks are not interpretable. As a result, clinicians often resort to known…

Best-of-$n$ is a widely used test-time scaling approach for LLM inference. Yet despite evidence that LLMs exhibit complementary strengths across tasks, traditionally best-of-$n$ relies on a single model to generate responses. We propose…

Machine Learning · Computer Science 2025-12-08 Jonathan Geuter , Gregor Kornhardt

Deep learning model inference is a key service in many businesses and scientific discovery processes. This paper introduces RIBBON, a novel deep learning inference serving system that meets two competing objectives: quality-of-service (QoS)…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-07-29 Baolin Li , Rohan Basu Roy , Tirthak Patel , Vijay Gadepally , Karen Gettings , Devesh Tiwari

Outcome Reporting Bias (ORB) poses significant threats to the validity of meta-analytic findings. It occurs when researchers selectively report outcomes based on the significance or direction of results, potentially leading to distorted…

Methodology · Statistics 2025-07-17 Alessandra Gaia Saracini , Leonhard Held

Under covariate shift, training (source) data and testing (target) data differ in input space distribution, but share the same conditional label distribution. This poses a challenging machine learning task. Robust Bias-Aware (RBA)…

Machine Learning · Computer Science 2018-01-01 Anqi Liu , Rizal Fathony , Brian D. Ziebart

Vulnerability reproduction paves a way in debugging software failures, which need intensive manual efforts. However, some key factors (e.g., software configuration, trigger method) are often missing, so we can not directly reproduce the…

Cryptography and Security · Computer Science 2021-10-26 Ligeng Chen , Jian Guo , Zhongling He , Dongliang Mu , Bing Mao

Although deep reinforcement learning has become a promising machine learning approach for sequential decision-making problems, it is still not mature enough for high-stake domains such as autonomous driving or medical applications. In such…

Machine Learning · Computer Science 2022-02-25 Claire Glanois , Paul Weng , Matthieu Zimmer , Dong Li , Tianpei Yang , Jianye Hao , Wulong Liu

Schizophrenia is a severe mental health condition that requires a long and complicated diagnostic process. However, early diagnosis is vital to control symptoms. Deep learning has recently become a popular way to analyse and interpret…

Machine Learning · Computer Science 2022-04-01 Daniel Organisciak , Hubert P. H. Shum , Ephraim Nwoye , Wai Lok Woo

Robust machine learning for regulatory genomics is studied under biologically and technically induced distribution shifts. Deep convolutional and attention based models achieve strong in distribution performance on DNA regulatory sequence…

Genomics · Quantitative Biology 2026-02-20 Yiyao Yang

Receiver operating characteristic (ROC) analysis is one of the most popular approaches for evaluating and comparing the accuracy of medical diagnostic tests. Although various methodologies have been developed for estimating ROC curves and…

Methodology · Statistics 2022-08-16 Ainesh Sewak , Torsten Hothorn

With the ubiquitous availability of unstructured data, growing attention is paid as how to adjust for selection bias in such non-probability samples. The majority of the robust estimators proposed by prior literature are either fully or…

Methodology · Statistics 2022-04-08 Ali Rafei , Michael R. Elliott , Carol A. C. Flannagan

Hybrid controlled trials (HCTs), which augment randomized controlled trials (RCTs) with external controls (ECs), are increasingly receiving attention as a way to address limited power, slow accrual, and ethical concerns in clinical…

Methodology · Statistics 2025-05-02 Jiajun Liu , Ke Zhu , Shu Yang , Xiaofei Wang

We introduce Robust Bayesian Sequential Borrowing (RBSB), a framework for extrapolating evidence across adjacent subgroups in multi-population clinical programmes where studies are conducted in sequence and populations are ordered by…

Methodology · Statistics 2026-04-27 Erik Hermansson , Lynn Dunsire , David Svensson , Thomas Jaki
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