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Nature has inspired various ground-breaking technological developments in applications ranging from robotics to aerospace engineering and the manufacturing of medical devices. However, accessing the information captured in scientific…

Computation and Language · Computer Science 2020-05-27 Ruben Kruiper , Julian F. V. Vincent , Jessica Chen-Burger , Marc P. Y. Desmulliez , Ioannis Konstas

Automatic extraction of information from publications is key to making scientific knowledge machine readable at a large scale. The extracted information can, for example, facilitate academic search, decision making, and knowledge graph…

Computation and Language · Computer Science 2024-04-02 Tarek Saier , Mayumi Ohta , Takuto Asakura , Michael Färber

Tasks, Datasets and Evaluation Metrics are important concepts for understanding experimental scientific papers. However, most previous work on information extraction for scientific literature mainly focuses on the abstracts only, and does…

Computation and Language · Computer Science 2021-01-26 Yufang Hou , Charles Jochim , Martin Gleize , Francesca Bonin , Debasis Ganguly

Large, high-quality annotated corpora remain scarce in document-level entity and relation extraction in zero-shot or few-shot settings. In this paper, we present a fully automatic, LLM-based pipeline for synthetic data generation and…

Computation and Language · Computer Science 2025-07-09 Nicholas Popovič , Ashish Kangen , Tim Schopf , Michael Färber

This paper presents DWIE, the 'Deutsche Welle corpus for Information Extraction', a newly created multi-task dataset that combines four main Information Extraction (IE) annotation subtasks: (i) Named Entity Recognition (NER), (ii)…

Computation and Language · Computer Science 2021-03-10 Klim Zaporojets , Johannes Deleu , Chris Develder , Thomas Demeester

Extracting structured and grounded fact triples from raw text is a fundamental task in Information Extraction (IE). Existing IE datasets are typically collected from Wikipedia articles, using hyperlinks to link entities to the Wikidata…

Computation and Language · Computer Science 2023-06-16 Chenxi Whitehouse , Clara Vania , Alham Fikri Aji , Christos Christodoulopoulos , Andrea Pierleoni

Scientific Information Extraction (ScientificIE) is a critical task that involves the identification of scientific entities and their relationships. The complexity of this task is compounded by the necessity for domain-specific knowledge…

Computation and Language · Computer Science 2023-12-27 Dong Pham , Xanh Ho , Quang-Thuy Ha , Akiko Aizawa

Proper citation is of great importance in academic writing for it enables knowledge accumulation and maintains academic integrity. However, citing properly is not an easy task. For published scientific entities, the ever-growing academic…

Digital Libraries · Computer Science 2022-10-20 Jialiang Lin , Yao Yu , Jiaxin Song , Xiaodong Shi

The processing of entities in natural language is essential to many medical NLP systems. Unfortunately, existing datasets vastly under-represent the entities required to model public health relevant texts such as health advice often found…

Computation and Language · Computer Science 2022-10-10 Joseph Gatto , Parker Seegmiller , Garrett Johnston , Sarah M. Preum

In this work, we present a Web-based annotation tool `Relation Triplets Extractor' \footnote{https://abera87.github.io/annotate/} (RTE) for annotating relation triplets from the text. Relation extraction is an important task for extracting…

Computation and Language · Computer Science 2021-08-19 Ankan Mullick , Animesh Bera , Tapas Nayak

Event Extraction (EE) is one of the fundamental tasks in Information Extraction (IE) that aims to recognize event mentions and their arguments (i.e., participants) from text. Due to its importance, extensive methods and resources have been…

Computation and Language · Computer Science 2022-11-21 Amir Pouran Ben Veyseh , Javid Ebrahimi , Franck Dernoncourt , Thien Huu Nguyen

We describe the SemEval task of extracting keyphrases and relations between them from scientific documents, which is crucial for understanding which publications describe which processes, tasks and materials. Although this was a new task,…

Computation and Language · Computer Science 2017-05-03 Isabelle Augenstein , Mrinal Das , Sebastian Riedel , Lakshmi Vikraman , Andrew McCallum

Multiple entities in a document generally exhibit complex inter-sentence relations, and cannot be well handled by existing relation extraction (RE) methods that typically focus on extracting intra-sentence relations for single entity pairs.…

Computation and Language · Computer Science 2019-08-12 Yuan Yao , Deming Ye , Peng Li , Xu Han , Yankai Lin , Zhenghao Liu , Zhiyuan Liu , Lixin Huang , Jie Zhou , Maosong Sun

AI agents have seen widespread adoption in information retrieval for scientific research, giving rise to tools such as Deep Research. However, existing retrieval agents mainly rely on keyword- or embedding-based methods. While effective at…

Computational Engineering, Finance, and Science · Computer Science 2026-05-25 Chenyang Shao , Fengli Xu , Yong Li

This paper is devoted to the extraction of entities and semantic relations between them from scientific texts, where we consider scientific terms as entities. In this paper, we present a dataset that includes annotations for two tasks and…

Computation and Language · Computer Science 2022-09-30 Elena Bruches , Olga Tikhobaeva , Yana Dementyeva , Tatiana Batura

End-to-end relation extraction aims to identify named entities and extract relations between them. Most recent work models these two subtasks jointly, either by casting them in one structured prediction framework, or performing multi-task…

Computation and Language · Computer Science 2021-03-24 Zexuan Zhong , Danqi Chen

The rapid expansion of medical informatics literature presents significant challenges in synthesizing and analyzing research trends. This study introduces a novel dataset derived from the Medical Informatics Europe (MIE) Conference…

Information Retrieval · Computer Science 2024-10-08 Ehsan Bitaraf , Maryam Jafarpour

We introduce RealKIE, a benchmark of five challenging datasets aimed at advancing key information extraction methods, with an emphasis on enterprise applications. The datasets include a diverse range of documents including SEC S1 Filings,…

Computation and Language · Computer Science 2025-10-07 Benjamin Townsend , Madison May , Katherine Mackowiak , Christopher Wells

Information Extraction (IE), encompassing Named Entity Recognition (NER), Named Entity Linking (NEL), and Relation Extraction (RE), is critical for transforming the rapidly growing volume of scientific publications into structured,…

In the rapidly evolving field of scientific research, efficiently extracting key information from the burgeoning volume of scientific papers remains a formidable challenge. This paper introduces an innovative framework designed to automate…

Information Retrieval · Computer Science 2024-01-31 Yangyang Liu , Shoubin Li