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Related papers: SAFE setup for generative molecular design

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Bayesian experimental design (BED) is to answer the question that how to choose designs that maximize the information gathering. For implicit models, where the likelihood is intractable but sampling is possible, conventional BED methods…

Machine Learning · Computer Science 2021-03-16 Jiaxin Zhang , Sirui Bi , Guannan Zhang

Despite the remarkable generative capabilities of diffusion models, their integration into safety-critical or scientifically rigorous applications remains hindered by the need to ensure compliance with stringent physical, structural, and…

Machine Learning · Computer Science 2025-06-03 Jacob K. Christopher , Michael Cardei , Jinhao Liang , Ferdinando Fioretto

The rapid evolution of modern malware presents significant challenges to the development of effective defense mechanisms. Traditional cyber deception techniques often rely on static or manually configured parameters, limiting their…

Cryptography and Security · Computer Science 2025-01-03 Shihab Ahmed , A B M Mohaimenur Rahman , Md Morshed Alam , Md Sajidul Islam Sajid

In semi-supervised learning, methods that rely on confidence learning to generate pseudo-labels have been widely proposed. However, increasing research finds that when faced with noisy and biased data, the model's representation network is…

Computer Vision and Pattern Recognition · Computer Science 2024-04-29 Yanbiao Ma , Licheng Jiao , Fang Liu , Lingling Li , Shuyuan Yang , Xu Liu

Recent advancements in conditional Generative Adversarial Networks (cGANs) have shown promises in label guided image synthesis. Semantic masks, such as sketches and label maps, are another intuitive and effective form of guidance in image…

Computer Vision and Pattern Recognition · Computer Science 2019-07-04 Yinhao Ren , Zhe Zhu , Yingzhou Li , Joseph Lo

Is there a unified model for generating molecules considering different conditions, such as binding pockets and chemical properties? Although target-aware generative models have made significant advances in drug design, they do not consider…

Artificial Intelligence · Computer Science 2023-02-15 Zhangyang Gao , Yuqi Hu , Cheng Tan , Stan Z. Li

Recently, utilizing reinforcement learning (RL) to generate molecules with desired properties has been highlighted as a promising strategy for drug design. A molecular docking program - a physical simulation that estimates protein-small…

Quantitative Methods · Quantitative Biology 2021-10-28 Soojung Yang , Doyeong Hwang , Seul Lee , Seongok Ryu , Sung Ju Hwang

Large Language Models (LLMs) can generate code but often introduce security vulnerabilities, logical inconsistencies, and compilation errors. Prior work demonstrates that LLMs benefit substantially from structured feedback, static analysis,…

Cryptography and Security · Computer Science 2026-01-05 Vidyut Sriram , Sawan Pandita , Achintya Lakshmanan , Aneesh Shamraj , Suman Saha

Safety fine-tuning helps align Large Language Models (LLMs) with human preferences for their safe deployment. To better understand the underlying factors that make models safe via safety fine-tuning, we design a synthetic data generation…

Machine Learning · Computer Science 2024-08-22 Samyak Jain , Ekdeep Singh Lubana , Kemal Oksuz , Tom Joy , Philip H. S. Torr , Amartya Sanyal , Puneet K. Dokania

Variational autoencoders (VAEs) defined over SMILES string and graph-based representations of molecules promise to improve the optimization of molecular properties, thereby revolutionizing the pharmaceuticals and materials industries.…

Machine Learning · Computer Science 2019-06-04 Zaccary Alperstein , Artem Cherkasov , Jason Tyler Rolfe

Significant strides have been made using large vision-language models, like Stable Diffusion (SD), for a variety of downstream tasks, including image editing, image correspondence, and 3D shape generation. Inspired by these advancements, we…

Computer Vision and Pattern Recognition · Computer Science 2024-03-15 Aliasghar Khani , Saeid Asgari Taghanaki , Aditya Sanghi , Ali Mahdavi Amiri , Ghassan Hamarneh

The Transformer architecture has opened a new paradigm in the domain of deep learning with its ability to model long-range dependencies and capture global context and has outpaced the traditional Convolution Neural Networks (CNNs) in many…

Computer Vision and Pattern Recognition · Computer Science 2025-03-12 Badhan Kumar Das , Ajay Singh , Saahil Islam , Gengyan Zhao , Andreas Maier

Medical image segmentation is crucial for computer-aided diagnosis, yet privacy constraints hinder data sharing across institutions. Federated learning addresses this limitation, but existing approaches often rely on lightweight…

Computer Vision and Pattern Recognition · Computer Science 2025-09-22 Tong Wang , Xingyue Zhao , Linghao Zhuang , Haoyu Zhao , Jiayi Yin , Yuyang He , Gang Yu , Bo Lin

In clinical research, the lack of events of interest often necessitates imbalanced learning. One approach to resolve this obstacle is data integration or sharing, but due to privacy concerns neither is practical. Therefore, there is an…

Machine Learning · Computer Science 2020-09-01 Seok-Ju Hahn , Junghye Lee

Quadrupedal robots exhibit remarkable adaptability in unstructured environments, making them well-suited for formation control in real-world applications. However, keeping stable formations while ensuring collision-free navigation presents…

Systems and Control · Electrical Eng. & Systems 2025-03-11 Weishu Zhan , Zheng Liang , Hongyu Song , Wei Pan

Graph-based representations such as Scene Graphs enable localization in structured indoor environments by matching a locally observed graph, constructed from sensor data, to a prior map. This process is particularly challenging in…

Vision Foundation Models (VFMs) have demonstrated impressive representational capabilities. However, adapting them to downstream tasks via full fine-tuning incurs prohibitive computational and storage overhead. Parameter-Efficient…

Computer Vision and Pattern Recognition · Computer Science 2026-05-28 Lingyu Xiong , Jinjin Shi , Xuran Xu , Cong Luo , Runyu Shi , Ying Huang

Automated front-end engineering drastically reduces development cycles and minimizes manual coding overhead. While Generative AI has shown promise in translating designs to code, current solutions often produce monolithic scripts, failing…

Information Retrieval · Computer Science 2025-12-23 Chong Liu , Ming Zhang , Fei Li , Hao Zhou , Xiaoshuang Chen , Ye Yuan

Augmentation by generative modelling yields a promising alternative to the accumulation of surgical data, where ethical, organisational and regulatory aspects must be considered. Yet, the joint synthesis of (image, mask) pairs for…

Computer Vision and Pattern Recognition · Computer Science 2025-07-02 Yannik Frisch , Christina Bornberg , Moritz Fuchs , Anirban Mukhopadhyay

Advances in CLIP and large multimodal models (LMMs) have enabled open-vocabulary and free-text segmentation, yet existing models still require predefined category prompts, limiting free-form category self-generation. Most segmentation LMMs…

Computer Vision and Pattern Recognition · Computer Science 2025-03-12 Kunyang Han , Yibo Hu , Mengxue Qu , Hailin Shi , Yao Zhao , Yunchao Wei