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Related papers: SAFE setup for generative molecular design

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Currently, large models are prone to generating harmful content when faced with complex attack instructions, significantly reducing their defensive capabilities. To address this issue, this paper proposes a method based on constructing data…

Cryptography and Security · Computer Science 2025-01-03 Keke Zhai

Mutagenicity is a concern due to its association with genetic mutations which can result in a variety of negative consequences, including the development of cancer. Earlier identification of mutagenic compounds in the drug development…

Machine Learning · Computer Science 2024-09-06 Tanya Liyaqat , Tanvir Ahmad , Mohammad Kashif , Chandni Saxena

Purpose: Large Language Models (LLMs) like GPT (Generative Pre-trained Transformer) from OpenAI and LLaMA (Large Language Model Meta AI) from Meta AI are increasingly recognized for their potential in the field of cheminformatics,…

Biomolecules · Quantitative Biology 2024-05-22 Shaghayegh Sadeghi , Alan Bui , Ali Forooghi , Jianguo Lu , Alioune Ngom

Motivated by collaborative localization in robotic sensor networks, we consider the problem of large-scale network localization where location estimates are derived from inter-node radio signals. Well-established methods for network…

Signal Processing · Electrical Eng. & Systems 2023-01-30 Lillian Clark , Sampad Mohanty , Bhaskar Krishnamachari

Large Language Models (LLMs) are increasingly applied in various science domains, yet their broader adoption remains constrained by a critical challenge: the lack of trustworthy, verifiable outputs. Current LLMs often generate answers…

Computation and Language · Computer Science 2025-09-25 João Eduardo Batista , Emil Vatai , Mohamed Wahib

Typical LiDAR SLAM architectures feature a front-end for odometry estimation and a back-end for refining and optimizing the trajectory and map, commonly through loop closures. However, loop closure detection in large-scale missions presents…

Computer Vision and Pattern Recognition · Computer Science 2025-12-02 Nikolaos Stathoulopoulos , Christoforos Kanellakis , George Nikolakopoulos

Generative models for molecules based on sequential line notation (e.g. SMILES) or graph representation have attracted an increasing interest in the field of structure-based drug design, but they struggle to capture important 3D spatial…

Machine Learning · Computer Science 2023-12-12 Wei Feng , Lvwei Wang , Zaiyun Lin , Yanhao Zhu , Han Wang , Jianqiang Dong , Rong Bai , Huting Wang , Jielong Zhou , Wei Peng , Bo Huang , Wenbiao Zhou

Recent advances in generative models, particularly diffusion and auto-regressive models, have revolutionized fields like computer vision and natural language processing. However, their application to structure-based drug design (SBDD)…

Machine Learning · Computer Science 2025-07-29 Yi He , Ailun Wang , Zhi Wang , Yu Liu , Xingyuan Xu , Wen Yan

Despite the extent of recent advances in Machine Learning (ML) and Neural Networks, providing formal guarantees on the behavior of these systems is still an open problem, and a crucial requirement for their adoption in regulated or…

Machine Learning · Computer Science 2024-10-01 Matteo Francobaldi , Michele Lombardi

The discovery of novel materials and functional molecules can help to solve some of society's most urgent challenges, ranging from efficient energy harvesting and storage to uncovering novel pharmaceutical drug candidates. Traditionally…

Machine Learning · Computer Science 2020-11-06 Mario Krenn , Florian Häse , AkshatKumar Nigam , Pascal Friederich , Alán Aspuru-Guzik

Labelling data is expensive and time consuming especially for domains such as medical imaging that contain volumetric imaging data and require expert knowledge. Exploiting a larger pool of labeled data available across multiple centers,…

Computer Vision and Pattern Recognition · Computer Science 2020-09-03 Daiqing Li , Amlan Kar , Nishant Ravikumar , Alejandro F Frangi , Sanja Fidler

The rapid increase in remote sensing satellites has led to the emergence of distributed space-based observation systems. However, existing distributed remote sensing models often rely on centralized training, resulting in data leakage,…

Machine Learning · Computer Science 2025-04-08 Xiaohe Li , Haohua Wu , Jiahao Li , Zide Fan , Kaixin Zhang , Xinming Li , Yunping Ge , Xinyu Zhao

Multivariate time series forecasting requires models to simultaneously capture variable-wise structural dependencies and generalize across diverse tasks. While structural encoders are effective in modeling feature interactions, they lack…

Computation and Language · Computer Science 2025-06-26 Fengze Li , Yue Wang , Yangle Liu , Ming Huang , Dou Hong , Jieming Ma

In many domains generating variable length sequences through insertions provides greater flexibility over autoregressive models. However, the action space of insertion models is much larger than that of autoregressive models (ARMs) making…

Multimodal Large Language Models (MLLMs) have serious security vulnerabilities.While safety alignment using multimodal datasets consisting of text and data of additional modalities can effectively enhance MLLM's security, it is costly to…

Computation and Language · Computer Science 2025-06-04 Weikai Lu , Hao Peng , Huiping Zhuang , Cen Chen , Ziqian Zeng

Most current Deep Learning-based Semantic Communication (DeepSC) systems are designed and trained exclusively for particular single-channel conditions, which restricts their adaptability and overall bandwidth utilization. To address this,…

Networking and Internet Architecture · Computer Science 2024-10-03 Yuna Yan , Lixin Li , Xin Zhang , Wensheng Lin , Wenchi Cheng , Zhu Han

Score-based generative models can produce high quality image samples comparable to GANs, without requiring adversarial optimization. However, existing training procedures are limited to images of low resolution (typically below 32x32), and…

Machine Learning · Computer Science 2020-10-27 Yang Song , Stefano Ermon

Designing shape memory alloys (SMAs) that meet performance targets while remaining affordable and sustainable is a complex challenge. In this work, we focus on optimizing SMA compositions to achieve a desired martensitic start temperature…

Machine Learning · Computer Science 2025-08-21 S. Josyula , Y. Noiman , E. J. Payton , T. Giovannelli

Semantic image synthesis (SIS) refers to the problem of generating realistic imagery given a semantic segmentation mask that defines the spatial layout of object classes. Most of the approaches in the literature, other than the quality of…

Computer Vision and Pattern Recognition · Computer Science 2023-07-12 Tomaso Fontanini , Claudio Ferrari , Massimo Bertozzi , Andrea Prati

Recently we proposed a general, ensemble-based feature engineering wrapper (FEW) that was paired with a number of machine learning methods to solve regression problems. Here, we adapt FEW for supervised classification and perform a thorough…

Neural and Evolutionary Computing · Computer Science 2017-08-07 William La Cava , Jason H. Moore