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Neuroimaging data, particularly from techniques like MRI or PET, offer rich but complex information about brain structure and activity. To manage this complexity, latent representation models - such as Autoencoders, Generative Adversarial…

Computer Vision and Pattern Recognition · Computer Science 2024-12-31 C. Vázquez-García , F. J. Martínez-Murcia , F. Segovia Román , Juan M. Górriz

Neurons in the brain represent external stimuli via neural codes. These codes often arise from stereotyped stimulus-response maps, associating to each neuron a convex receptive field. An important problem confronted by the brain is to infer…

Neurons and Cognition · Quantitative Biology 2015-02-25 Carina Curto , Vladimir Itskov , Alan Veliz-Cuba , Nora Youngs

Reconstructing visual stimulus (image) only from human brain activity measured with functional Magnetic Resonance Imaging (fMRI) is a significant and meaningful task in Human-AI collaboration. However, the inconsistent distribution and…

Computer Vision and Pattern Recognition · Computer Science 2019-10-23 Ziqi Ren , Jie Li , Xuetong Xue , Xin Li , Fan Yang , Zhicheng Jiao , Xinbo Gao

Understanding the encoding and decoding mechanisms of dynamic neural responses to different visual stimuli is an important topic in exploring how the brain represents visual information. Currently, hierarchically deep neural networks (DNNs)…

Neurons and Cognition · Quantitative Biology 2025-12-24 Jingyi Feng , Xiang Feng

Experimental studies support the notion of spike-based neuronal information processing in the brain, with neural circuits exhibiting a wide range of temporally-based coding strategies to rapidly and efficiently represent sensory stimuli.…

Neural and Evolutionary Computing · Computer Science 2020-08-18 Brian Gardner , André Grüning

Recent learning-based approaches have made astonishing advances in calibrated medical imaging like computerized tomography (CT), yet they struggle to generalize in uncalibrated modalities -- notably magnetic resonance (MR) imaging, where…

Computer Vision and Pattern Recognition · Computer Science 2024-03-12 Peirong Liu , Oula Puonti , Xiaoling Hu , Daniel C. Alexander , Juan E. Iglesias

Biological visual systems learn from limited experience, unlike deep learning models that rely on millions of training images. What learning principles make this possible? We tested whether efficient coding, the idea that neural…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Ananya Passi , Brian S. Robinson , Michael F. Bonner

The remarkable performance of convolutional neural networks (CNNs) is entangled with their huge number of uninterpretable parameters, which has become the bottleneck limiting the exploitation of their full potential. Towards network…

Computer Vision and Pattern Recognition · Computer Science 2020-08-26 Yuchao Li , Rongrong Ji , Shaohui Lin , Baochang Zhang , Chenqian Yan , Yongjian Wu , Feiyue Huang , Ling Shao

The many variations of Implicit Neural Representations (INRs), where a neural network is trained as a continuous representation of a signal, have tremendous practical utility for downstream tasks including novel view synthesis, video…

Computer Vision and Pattern Recognition · Computer Science 2024-07-17 Namitha Padmanabhan , Matthew Gwilliam , Pulkit Kumar , Shishira R Maiya , Max Ehrlich , Abhinav Shrivastava

Interpretable brain network models for disease prediction are of great value for the advancement of neuroscience. GNNs are promising to model complicated network data, but they are prone to overfitting and suffer from poor interpretability,…

Machine Learning · Computer Science 2021-07-13 Hejie Cui , Wei Dai , Yanqiao Zhu , Xiaoxiao Li , Lifang He , Carl Yang

Modeling natural phenomena with artificial neural networks (ANNs) often provides highly accurate predictions. However, ANNs often suffer from over-parameterization, complicating interpretation and raising uncertainty issues. Bayesian neural…

Machine Learning · Statistics 2025-03-14 Eirik Høyheim , Lars Skaaret-Lund , Solve Sæbø , Aliaksandr Hubin

We present neural activation coding (NAC) as a novel approach for learning deep representations from unlabeled data for downstream applications. We argue that the deep encoder should maximize its nonlinear expressivity on the data for…

Machine Learning · Computer Science 2021-12-09 Yookoon Park , Sangho Lee , Gunhee Kim , David M. Blei

We propose a novel deep neural network architecture to integrate imaging and genetics data, as guided by diagnosis, that provides interpretable biomarkers. Our model consists of an encoder, a decoder and a classifier. The encoder learns a…

Implicit Neural Representations (INRs) have revolutionized signal representation by leveraging neural networks to provide continuous and smooth representations of complex data. However, existing INRs face limitations in capturing…

Computer Vision and Pattern Recognition · Computer Science 2023-10-31 Amirhossein Kazerouni , Reza Azad , Alireza Hosseini , Dorit Merhof , Ulas Bagci

Deep Neural Networks (DNNs) demonstrate remarkable capabilities in learning complex hierarchical data representations, but the nature of these representations remains largely unknown. Existing global explainability methods, such as Network…

Machine Learning · Computer Science 2024-01-19 Kirill Bykov , Laura Kopf , Shinichi Nakajima , Marius Kloft , Marina M. -C. Höhne

Dendrites are crucial structures for computation of an individual neuron. It has been shown that the dynamics of a biological neuron with dendrites can be approximated by artificial neural networks (ANN) with deep structure. However, it…

Neurons and Cognition · Quantitative Biology 2023-05-23 Jingyang Ma , Songting Li , Douglas Zhou

Predicting brain activity in response to naturalistic, multimodal stimuli is a key challenge in computational neuroscience. While encoding models are becoming more powerful, their ability to generalize to truly novel contexts remains a…

Computer Vision and Pattern Recognition · Computer Science 2025-07-28 Hamid Abdollahi , Amir Hossein Mansouri Majoumerd , Amir Hossein Bagheri Baboukani , Amir Abolfazl Suratgar , Mohammad Bagher Menhaj

Graph convolutional networks learn effective node embeddings that have proven to be useful in achieving high-accuracy prediction results in semi-supervised learning tasks, such as node classification. However, these networks suffer from the…

Machine Learning · Computer Science 2020-10-21 Mahsa Mesgaran , A. Ben Hamza

As deep learning systems are scaled up to many billions of parameters, relating their internal structure to external behaviors becomes very challenging. Although daunting, this problem is not new: Neuroscientists and cognitive scientists…

We introduce LearnAD, a neuro-symbolic method for predicting Alzheimer's disease from brain magnetic resonance imaging data, learning fully interpretable rules. LearnAD applies statistical models, Decision Trees, Random Forests, or GNNs to…

Machine Learning · Computer Science 2026-01-06 Thomas Andrews , Mark Law , Sara Ahmadi-Abhari , Alessandra Russo