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We study macroevolutionary dynamics by extending microevolutionary competition models to long time scales. It has been shown that for a general class of competition models, gradual evolutionary change in continuous phenotypes (evolutionary…

Populations and Evolution · Quantitative Biology 2017-02-14 Michael Doebeli , Iaroslav Ispolatov

The human brain is a complex inter-wired system that emerges spontaneous functional fluctuations. In spite of tremendous success in the experimental neuroscience field, a system-level understanding of how brain anatomy supports various…

Neurons and Cognition · Quantitative Biology 2024-05-28 Tingting Dan , Ziquan Wei , Won Hwa Kim , Guorong Wu

The brain is in a state of perpetual reverberant neural activity, even in the absence of specific tasks or stimuli. Shedding light on the origin and functional significance of such a dynamical state is essential to understanding how the…

Statistical Mechanics · Physics 2022-07-08 Guillermo B. Morales , Serena Di Santo , Miguel A. Munoz

The integration and transmission of information in the brain are dependent on the interplay between structural and dynamical properties. Implicit in any pursuit aimed at understanding neural dynamics from appropriate sets of mathematically…

Neurons and Cognition · Quantitative Biology 2020-06-30 Joshua M. Roldan , Sebastian Pardo G. , Vivek Kurien George , Gabriel A. Silva

This article reviews the role of hidden symmetries of dynamics in the study of physical systems, from the basic concepts of symmetries in phase space to the forefront of current research. Such symmetries emerge naturally in the description…

Mathematical Physics · Physics 2015-06-23 Marco Cariglia

Confinement is an intriguing phenomenon prevalent in condensed matter and high-energy physics. Exploring its effect on the far-from-equilibrium criticality of quantum many-body systems is of great interest both from a fundamental and…

Quantum Gases · Physics 2025-10-20 Jesse Osborne , Ian P. McCulloch , Jad C. Halimeh

Dynamics of a chaotic spiking neuron model are being studied mathematically and experimentally. The Nonlinear Dynamic State neuron (NDS) is analysed to further understand the model and improve it. Chaos has many interesting properties such…

Artificial Intelligence · Computer Science 2013-10-29 Mohammad Alhawarat , Waleed Nazih , Mohammad Eldesouki

The phase--space volume of regions of regular or trapped motion, for bounded or scattering systems with two degrees of freedom respectively, displays universal properties. In particular, sudden reductions in the phase-space volume or gaps…

Chaotic Dynamics · Physics 2010-10-28 L. Benet , O. Merlo

Nucleation and growth is the dominant relaxation mechanism driving first order phase transitions. In two-dimensional at systems nucleation has been applied to a wide range of problems in physics, chemistry and biology. Here we study…

Soft Condensed Matter · Physics 2016-03-09 Leopoldo R. Gomez , Nicolas A. Garcia , Vincenzo Vitelli , Jose Lorenzana , Daniel A. Vega

The aim of this work is to establish the existence of invariant manifolds in complex systems. Considering trajectory curves integral of multiple time scales dynamical systems of dimension two and three (predator-prey models, neuronal…

Dynamical Systems · Mathematics 2014-08-19 Jean-Marc Ginoux , Bruno Rossetto

The dynamics on a chaotic attractor can be quite heterogeneous, being much more unstable in some regions than others. Some regions of a chaotic attractor can be expanding in more dimensions than other regions. Imagine a situation where two…

Chaotic Dynamics · Physics 2018-11-14 Yoshitaka Saiki , Miguel A. F. Sanjuan , James A. Yorke

We report measurements of the brain activity of subjects engaged in behavioral exchanges with their environments. We observe brain states which are characterized by coordinated oscillation of populations of neurons that are changing rapidly…

Neurons and Cognition · Quantitative Biology 2007-05-23 Walter J. Freeman , Giuseppe Vitiello

We introduce a model of randomly connected neural populations and study its dynamics by means of the dynamical mean-field theory and simulations. Our analysis uncovers a rich phase diagram, featuring high- and low-dimensional chaotic…

Biological Physics · Physics 2025-05-01 Łukasz Kuśmierz , Ulises Pereira-Obilinovic , Zhixin Lu , Dana Mastrovito , Stefan Mihalas

Deep learning models are often considered black boxes due to their complex hierarchical transformations. Identifying suitable architectures is crucial for maximizing predictive performance with limited data. Understanding the geometric…

Machine Learning · Computer Science 2025-03-11 Michael Wienczkowski , Addisu Desta , Paschal Ugochukwu

We numerically investigate the hydrodynamics and membrane dynamics of multicomponent vesicles in two strongly confined geometries. This serves as a simplified model for red blood cells undergoing large deformations while traversing narrow…

Soft Condensed Matter · Physics 2023-08-21 Ashley Gannon , Bryan Quaife , Y. -N. Young

Neural models learn representations of high-dimensional data on low-dimensional manifolds. Multiple factors, including stochasticities in the training process, model architectures, and additional inductive biases, may induce different…

Machine Learning · Computer Science 2025-12-02 Hanlin Yu , Berfin Inal , Georgios Arvanitidis , Soren Hauberg , Francesco Locatello , Marco Fumero

Active nematic fluids confined in narrow channels generate spontaneous flows when the activity is sufficiently intense. Recently, it was shown that if the molecular anchoring at the channel walls is conflicting flows are initiated even in…

Soft Condensed Matter · Physics 2021-11-02 C. Rorai , F. Toschi , I. Pagonabarraga

We describe a non-Arrhenius mechanism for slowing down of dynamics that is inherent to the high dimensionality of the phase space. We show that such a mechanism is at work both in a family of mean-field spin-glass models without any domain…

Condensed Matter · Physics 2016-08-31 Jorge Kurchan , Laurent Laloux

Navigation of microorganisms is controlled by internal processes ultimately sensitive to mechanical or chemical signaling encountered along the path. In many natural environments, such as porous soils or physiological ducts, motile species…

We study how the connectivity within a recurrent neural network determines and is determined by the multistable solutions of network activity. To gain analytic tractability we let neural activation be a non-smooth Heaviside step function.…

Neural and Evolutionary Computing · Computer Science 2023-03-09 Magnus Tournoy , Brent Doiron