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Graph Transformer (GT), as a special type of Graph Neural Networks (GNNs), utilizes multi-head attention to facilitate high-order message passing. However, this also imposes several limitations in node classification applications: 1) nodes…

Machine Learning · Computer Science 2024-10-16 Jiajun Zhou , Xuanze Chen , Chenxuan Xie , Yu Shanqing , Qi Xuan , Xiaoniu Yang

We revisit hierarchical bracketing encodings from a practical perspective in the context of dependency graph parsing. The approach encodes graphs as sequences, enabling linear-time parsing with $n$ tagging actions, and still representing…

Computation and Language · Computer Science 2025-09-12 Ana Ezquerro , Carlos Gómez-Rodríguez , David Vilares

An important aspect subtending language understanding and production is the ability to independently encode positional and symbolic information of the words within a sentence. In Transformers, positional information is typically encoded…

Machine Learning · Computer Science 2025-11-18 Felipe Urrutia , Jorge Salas , Alexander Kozachinskiy , Cristian Buc Calderon , Hector Pasten , Cristobal Rojas

Recently, transformer architectures for graphs emerged as an alternative to established techniques for machine learning with graphs, such as (message-passing) graph neural networks. So far, they have shown promising empirical results, e.g.,…

Machine Learning · Computer Science 2024-04-01 Luis Müller , Mikhail Galkin , Christopher Morris , Ladislav Rampášek

Mesh models are a promising approach for encoding the structure of 3D objects. Current mesh reconstruction systems predict uniformly distributed vertex locations of a predetermined graph through a series of graph convolutions, leading to…

Computer Vision and Pattern Recognition · Computer Science 2019-02-01 Edward J. Smith , Scott Fujimoto , Adriana Romero , David Meger

We examine two fundamental tasks associated with graph representation learning: link prediction and semi-supervised node classification. We present a novel autoencoder architecture capable of learning a joint representation of both local…

Machine Learning · Computer Science 2019-03-12 Phi Vu Tran

Transformer based language models exhibit intelligent behaviors such as understanding natural language, recognizing patterns, acquiring knowledge, reasoning, planning, reflecting and using tools. This paper explores how their underlying…

Machine Learning · Computer Science 2023-11-15 Sumeet S. Singh

While tokenized graph Transformers have demonstrated strong performance in node classification tasks, their reliance on a limited subset of nodes with high similarity scores for constructing token sequences overlooks valuable information…

Machine Learning · Computer Science 2025-02-18 Jinsong Chen , Hanpeng Liu , John E. Hopcroft , Kun He

Human learners are adept at grasping the complex relationships underlying incoming sequential input. In the present work, we formalize complex relationships as graph structures derived from temporal associations in motor sequences. Next, we…

Neurons and Cognition · Quantitative Biology 2018-10-31 Ari E. Kahn , Elisabeth A. Karuza , Jean M. Vettel , Danielle S. Bassett

Convolution operations designed for graph-structured data usually utilize the graph Laplacian, which can be seen as message passing between the adjacent neighbors through a generic random walk. In this paper, we propose PAN, a new graph…

Machine Learning · Computer Science 2019-07-22 Zheng Ma , Ming Li , Yuguang Wang

Graph Transformers typically rely on explicit positional or structural encodings and dense global attention to incorporate graph topology. In this work, we show that neither is essential. We introduce HopFormer, a graph Transformer that…

Machine Learning · Computer Science 2026-02-03 Sanggeon Yun , Raheeb Hassan , Ryozo Masukawa , Sungheon Jeong , Mohsen Imani

Understanding traffic scenes requires considering heterogeneous information about dynamic agents and the static infrastructure. In this work we propose SCENE, a methodology to encode diverse traffic scenes in heterogeneous graphs and to…

Computer Vision and Pattern Recognition · Computer Science 2023-01-10 Thomas Monninger , Julian Schmidt , Jan Rupprecht , David Raba , Julian Jordan , Daniel Frank , Steffen Staab , Klaus Dietmayer

Self-supervised auto-encoders have emerged as a successful framework for representation learning in computer vision and natural language processing in recent years, However, their application to graph data has been met with limited…

Artificial Intelligence · Computer Science 2023-01-31 Chengyu Sun

Node embedding is a powerful approach for representing the structural role of each node in a graph. $\textit{Node2vec}$ is a widely used method for node embedding that works by exploring the local neighborhoods via biased random walks on…

Social and Information Networks · Computer Science 2022-05-17 Renming Liu , Matthew Hirn , Arjun Krishnan

We present Graformer, a novel Transformer-based encoder-decoder architecture for graph-to-text generation. With our novel graph self-attention, the encoding of a node relies on all nodes in the input graph - not only direct neighbors -…

Computation and Language · Computer Science 2021-04-28 Martin Schmitt , Leonardo F. R. Ribeiro , Philipp Dufter , Iryna Gurevych , Hinrich Schütze

Unsupervised multimodal change detection is a practical and challenging topic that can play an important role in time-sensitive emergency applications. To address the challenge that multimodal remote sensing images cannot be directly…

Computer Vision and Pattern Recognition · Computer Science 2023-02-08 Hongruixuan Chen , Naoto Yokoya , Chen Wu , Bo Du

Renormalization of complex networks requires principled criteria for assessing whether a coarse-graining preserves dynamical content. We prove that discrete harmonic morphisms -- surjective maps preserving harmonic functions -- provide the…

Statistical Mechanics · Physics 2026-04-15 Francesco Maria Guadagnuolo , Marco Nurisso , Federica Galluzzi , Antoine Allard , Giovanni Petri

Integrating compositional and symbolic properties into current distributional semantic spaces can enhance the interpretability, controllability, compositionality, and generalisation capabilities of Transformer-based auto-regressive language…

Computation and Language · Computer Science 2026-04-16 Yingji Zhang , Danilo S. Carvalho , André Freitas

Recent studies have demonstrated the effectiveness of position encoding in transformer architectures. By incorporating positional information, this approach provides essential guidance for modeling dependencies between elements across…

Machine Learning · Computer Science 2025-08-27 Avinash Amballa

While music remains a challenging domain for generative models like Transformers, recent progress has been made by exploiting suitable musically-informed priors. One technique to leverage information about musical structure in Transformers…

Sound · Computer Science 2025-02-18 Manvi Agarwal , Changhong Wang , Gael Richard
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