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The kinetics of the self-assembly of nanocomponents into a virus, nanocapsule, or other composite structure is analyzed via a multiscale approach. The objective is to achieve predictability and to preserve key atomic-scale features that…

Chemical Physics · Physics 2015-05-18 Stephen Pankavich , Zeina Shreif , Yinglong Miao , Peter Ortoleva

We examine the budding of a nanoscale particle through a lipid bilayer using molecular dynamics simulations, free energy calculations, and an elastic theory, with the aim of determining the extent to which equilibrium elasticity theory can…

Subcellular Processes · Quantitative Biology 2012-02-22 Teresa Ruiz-Herrero , Enrique Velasco , Michael F. Hagan

Nanoparticle agglomeration in a quiescent fluid is simulated by solving the Langevin equations of motion of a set of interacting monomers in the continuum regime. Monomers interact via a radial, rapidly decaying intermonomer potential. The…

Statistical Mechanics · Physics 2010-08-13 Lorenzo Isella , Yannis Drossinos

We present a theory of optical absorption by interlayer excitons in a heterobilayer formed from transition metal dichalcogenides. The theory accounts for the presence of small relative rotations that produce a momentum shift between…

Mesoscale and Nanoscale Physics · Physics 2018-01-24 Fengcheng Wu , Timothy Lovorn , A. H. MacDonald

Living organisms, ecosystems, and social systems are examples of complex systems in which robustness against inclusion of new elements is an essential feature. A recently proposed simple model has revealed a general mechanism by which such…

Adaptation and Self-Organizing Systems · Physics 2018-01-24 Fumiko Ogushi , János Kertész , Kimmo Kaski , Takashi Shimada

The structural control of silicon nanocrystals is an important technological problem. Typically a distribution of nanocrystal sizes and shapes emerges under the uncontrolled aggregation of smaller clusters. The aim of this computational…

Materials Science · Physics 2008-04-15 C. Bulutay

This article summarizes a variety of physical mechanisms proposed in the literature, which can generate micro- and nanodomains in multicomponent lipid bilayers and biomembranes. It mainly focusses on lipid-driven mechanisms that do not…

Biological Physics · Physics 2016-11-16 Friederike Schmid

We simulate the collision of atomic clusters with a weakly attractive surface using molecular dynamics in a regime between soft-landing and fragmentation, where the cluster undergoes large deformation but remains intact. As a function of…

Materials Science · Physics 2007-05-23 A. Awasthi , S. C. Hendy , P. Zoontjens , S. A. Brown

Moir\'e materials offer a versatile platform for engineering excitons with unprecedented control, promising next-generation optoelectronic applications. While continuum models are widely used to study moir\'e excitons due to their…

Materials Science · Physics 2025-10-08 Indrajit Maity , Johannes Lischner , Arash A. Mostofi , Ángel Rubio

Nanobubbles formed in monolayers of transition metal dichalcogenides (TMDCs) on top of a substrate feature localized potentials, in which electrons can be captured. We show that the captured electronic density can exhibit a non-trivial…

Mesoscale and Nanoscale Physics · Physics 2021-12-22 Roberto Rosati , Frank Lengers , Christian Carmesin , Matthias Florian , Tilmann Kuhn , Frank Jahnke , Michael Lorke , Doris E. Reiter

The valence band edge in tiny angle twist bilayers of MoS$_2$ and phosphorene is shown to consist of highly localized energy levels created by a `moir\'e quantum well', i.e. trapped by the interlayer moir\'e potential. These approximately…

Mesoscale and Nanoscale Physics · Physics 2019-01-16 M. Fleischmann , R. Gupta , S. Sharma , S. Shallcross

We consider the self-assembly of composite structures from a group of nanocomponents, each consisting of particles within an $N$-atom system. Self-assembly pathways and rates for nanocomposites are derived via a multiscale analysis of the…

Biological Physics · Physics 2014-01-06 Stephen Pankavich , Peter Ortoleva

Spin dynamics of nanomolecules and nanoclusters are analyzed. The nanosizes of these objects make it possible to consider them as single-domain magnets with a large total spin, where the motion of the spins of all atoms, composing a…

Mesoscale and Nanoscale Physics · Physics 2015-06-12 V. I. Yukalov , E. P. Yukalova

The ability to predict the morphology of crystals formed by chemical reactions is of fundamental importance for the shape-controlled synthesis of nanostructures. Based on the atomistic mechanism for crystal growth under different driving…

Materials Science · Physics 2009-11-13 B. Viswanath , Paromita Kundu , B. Mukherjee , N. Ravishankar

The atomic structure of the supercooled liquid has often been discussed as a key source of glass formation in metals. The presence of icosahedrally-coordinated clusters and their tendency to form networks have been identified as one…

Materials Science · Physics 2013-10-30 Logan Ward , Dan Miracle , Wolfgang Windl , Oleg Senkov , Katharine Flores

Moving nanoparticles/atoms to study the nearfield interaction between them is one of the many approaches to explore the optical and electrical properties of these assemblies. Traditional approach included the self assembly by spinning or…

Mesoscale and Nanoscale Physics · Physics 2015-01-09 Farbod Shafiei

As a first step to understanding the role of molecular or chemical polydispersity in self-assembly, we put forward a coarse-grained model that describes the spontaneous formation of quasi-linear polymers in solutions containing two…

Soft Condensed Matter · Physics 2015-06-03 Sara Jabbari-Farouji , Paul van der Schoot

We report computer simulation results on the cluster formation of dipolar colloidal particles driven by a rotating external field in a quasi-two-dimensional setup. We focus on the interplay between permanent dipolar and hydrodynamic…

Soft Condensed Matter · Physics 2015-06-12 Sebastian Jäger , Holger Stark , Sabine H. L. Klapp

As a first step to understanding the role of molecular or chemical polydispersity in self-assembly, we put forward a coarse-grained model that describes the spontaneous formation of quasi-linear polymers in solutions containing two…

Soft Condensed Matter · Physics 2015-05-19 Sara Jabbari-Farouji , Paul van der Schoot

The simplest prescription for building a patterned structure from its constituents is to add particles, one at a time, to an appropriate template. However, self-organizing molecular and colloidal systems in nature can evolve in much more…

Statistical Mechanics · Physics 2009-04-07 Stephen Whitelam , Edward H. Feng , Michael F. Hagan , Phillip L. Geissler