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Annotating a large-scale in-the-wild person re-identification dataset especially of marathon runners is a challenging task. The variations in the scenarios such as camera viewpoints, resolution, occlusion, and illumination make the problem…

Computer Vision and Pattern Recognition · Computer Science 2021-04-08 Pranjal Singh Rajput , Yeshwanth Napolean , Jan van Gemert

Multi-rater annotations commonly occur when medical images are independently annotated by multiple experts (raters). In this paper, we tackle two challenges arisen in multi-rater annotations for medical image segmentation (called ambiguous…

Computer Vision and Pattern Recognition · Computer Science 2024-08-26 Jinhong Wang , Yi Cheng , Jintai Chen , Hongxia Xu , Danny Chen , Jian Wu

The intensive care unit (ICU) is a specialized hospital space where critically ill patients receive intensive care and monitoring. Comprehensive monitoring is imperative in assessing patients conditions, in particular acuity, and ultimately…

Artificial Intelligence · Computer Science 2024-11-25 Subhash Nerella , Ziyuan Guan , Scott Siegel , Jiaqing Zhang , Ruilin Zhu , Kia Khezeli , Azra Bihorac , Parisa Rashidi

Annotated datasets are an essential ingredient to train, evaluate, compare and productionalize supervised machine learning models. It is therefore imperative that annotations are of high quality. For their creation, good quality management…

Machine Learning · Computer Science 2024-05-30 Jan-Christoph Klie , Juan Haladjian , Marc Kirchner , Rahul Nair

Continuity of care is crucial to ensuring positive health outcomes for patients discharged from an inpatient hospital setting, and improved information sharing can help. To share information, caregivers write discharge notes containing…

Computation and Language · Computer Science 2021-06-07 James Mullenbach , Yada Pruksachatkun , Sean Adler , Jennifer Seale , Jordan Swartz , T. Greg McKelvey , Hui Dai , Yi Yang , David Sontag

Machine learning models that utilize patient data across time (rather than just the most recent measurements) have increased performance for many risk stratification tasks in the intensive care unit. However, many of these models and their…

Machine Learning · Computer Science 2021-09-24 Nari Johnson , Sonali Parbhoo , Andrew Slavin Ross , Finale Doshi-Velez

Healthcare data suffers from both noise and lack of ground truth. The cost of data increases as it is cleaned and annotated in healthcare. Unlike other data sets, medical data annotation, which is critical to accurate ground truth, requires…

Signal Processing · Electrical Eng. & Systems 2020-10-13 V. Ratna Saripalli , Gopal Avinash , Dibyajyoti Pati , Michael Potter , Charles W. Anderson

Providing computational infrastructure for handling diverse intensive care unit (ICU) datasets, the R package 'ricu' enables writing dataset-agnostic analysis code, thereby facilitating multi-center training and validation of machine…

Applications · Statistics 2021-08-03 Nicolas Bennett , Drago Plečko , Ida-Fong Ukor , Nicolai Meinshausen , Peter Bühlmann

Reliable machine-learning models in biomedical settings depend on accurate labels, yet annotating biomedical time-series data remains challenging. Algorithmic sample selection may support annotation, but evidence from studies involving real…

Machine Learning · Computer Science 2026-03-30 Einari Vaaras , Manu Airaksinen , Okko Räsänen

Annotating medical images, particularly for organ segmentation, is laborious and time-consuming. For example, annotating an abdominal organ requires an estimated rate of 30-60 minutes per CT volume based on the expertise of an annotator and…

Image and Video Processing · Electrical Eng. & Systems 2025-07-09 Chongyu Qu , Tiezheng Zhang , Hualin Qiao , Jie Liu , Yucheng Tang , Alan Yuille , Zongwei Zhou

The intensive care unit (ICU) comprises a complex hospital environment, where decisions made by clinicians have a high level of risk for the patients' lives. A comprehensive care pathway must then be followed to reduce p complications.…

The lack of contextual information in text data can make the annotation process of text-based emotion classification datasets challenging. As a result, such datasets often contain labels that fail to consider all the relevant emotions in…

Computation and Language · Computer Science 2023-11-08 Daniel Yang , Aditya Kommineni , Mohammad Alshehri , Nilamadhab Mohanty , Vedant Modi , Jonathan Gratch , Shrikanth Narayanan

Clinical decision making is challenging because of pathological complexity, as well as large amounts of heterogeneous data generated as part of routine clinical care. In recent years, machine learning tools have been developed to aid this…

Computer-assisted surgery research requires large, deeply annotated video datasets that capture clinical and technical variability. Existing cataract surgery resources lack the diversity and annotation depth required to train generalizable…

Interactive segmentation plays a crucial role in accelerating the annotation, particularly in domains requiring specialized expertise such as nuclear medicine. For example, annotating lesions in whole-body Positron Emission Tomography (PET)…

Image and Video Processing · Electrical Eng. & Systems 2024-04-03 Zdravko Marinov , Moon Kim , Jens Kleesiek , Rainer Stiefelhagen

Clinical studies often require understanding elements of a patient's narrative that exist only in free text clinical notes. To transform notes into structured data for downstream use, these elements are commonly extracted and normalized to…

Computation and Language · Computer Science 2020-08-03 Monica Agrawal , Chloe O'Connell , Yasmin Fatemi , Ariel Levy , David Sontag

Intensive Care Units (ICUs) are critical environments characterized by high-stakes monitoring and complex data management. However, current practices often rely on manual data transcription and fragmented information systems, introducing…

Human-Computer Interaction · Computer Science 2025-12-11 Yibowen Zhao , Yiming Cao , Zhiqi Shen , Juan Du , Yonghui Xu , Lizhen Cui , Cyril Leung

High throughput extraction and structured labeling of data from academic articles is critical to enable downstream machine learning applications and secondary analyses. We have embedded multimodal data curation into the academic publishing…

Computation and Language · Computer Science 2024-09-26 Jorge Abreu-Vicente , Hannah Sonntag , Thomas Eidens , Cassie S. Mitchell , Thomas Lemberger

Health conditions among patients in intensive care units (ICUs) are monitored via electronic health records (EHRs), composed of numerical time series and lengthy clinical note sequences, both taken at irregular time intervals. Dealing with…

Machine Learning · Computer Science 2023-06-07 Xinlu Zhang , Shiyang Li , Zhiyu Chen , Xifeng Yan , Linda Petzold

Intensive care unit (ICU) patients often develop new health-related problems in their long-term recovery. Health care professionals keeping a diary of a patient's stay is a proven strategy to tackle this but faces several adoption barriers,…

Human-Computer Interaction · Computer Science 2024-02-26 Samuel Kernan Freire , Margo MC van Mol , Carola Schol , Elif Özcan Vieira
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