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The ever-increasing amount of data in biomedical research, and in cancer research in particular, needs to be managed to support efficient data access, exchange and integration. Existing software infrastructures, such caGrid, support access…

Artificial Intelligence · Computer Science 2010-12-30 Alejandra Gonzalez-Beltran , Ben Tagger , Anthony Finkelstein

Hybrid MKNF knowledge bases are one of the most prominent tightly integrated combinations of open-world ontology languages with closed-world (non-monotonic) rule paradigms. The definition of Hybrid MKNF is parametric on the description…

Artificial Intelligence · Computer Science 2011-12-12 José Júlio Alferes , Matthias Knorr , Terrance Swift

Ontology alignment, a critical process in the Semantic Web for detecting relationships between different ontologies, has traditionally focused on identifying so-called "simple" 1-to-1 relationships through class labels and properties…

Artificial Intelligence · Computer Science 2024-07-24 Reihaneh Amini , Sanaz Saki Norouzi , Pascal Hitzler , Reza Amini

SHACL and OWL are two prominent W3C standards for managing RDF data. These languages share many features, but they have one fundamental difference: OWL, designed for inferring facts from incomplete data, makes the open-world assumption,…

Logic in Computer Science · Computer Science 2026-01-21 Anouk Oudshoorn , Magdalena Ortiz , Mantas Simkus

The Semantic Web effort has steadily been gaining traction in the recent years. In particular,Web search companies are recently realizing that their products need to evolve towards having richer semantic search capabilities. Description…

Artificial Intelligence · Computer Science 2012-10-19 Thomas Lukasiewicz , Maria Vanina Martinez , Giorgio Orsi , Gerardo I. Simari

We study the problem of learning description logic (DL) ontologies in Angluin et al.'s framework of exact learning via queries. We admit membership queries ("is a given subsumption entailed by the target ontology?") and equivalence queries…

Machine Learning · Computer Science 2017-09-22 Boris Konev , Carsten Lutz , Ana Ozaki , Frank Wolter

With the web getting bigger and assimilating knowledge about different concepts and domains, it is becoming very difficult for simple database driven applications to capture the data for a domain. Thus developers have come out with ontology…

Artificial Intelligence · Computer Science 2014-04-22 Iti Mathur , Nisheeth Joshi , Hemant Darbari , Ajai Kumar

Large Language Models (LLMs) have recently made significant strides in complex reasoning tasks through the Chain-of-Thought technique. Despite this progress, their reasoning is often constrained by their intrinsic understanding, lacking…

Computation and Language · Computer Science 2023-12-05 Zhangyue Yin , Qiushi Sun , Cheng Chang , Qipeng Guo , Junqi Dai , Xuanjing Huang , Xipeng Qiu

Despite the large-scale uptake of semantic technologies in the biomedical domain, little is known about common modelling practices in published ontologies. OWL ontologies are often published only in the crude form of sets of axioms leaving…

Artificial Intelligence · Computer Science 2022-07-29 Christian Kindermann , Martin G. Skjæveland

Semantic reasoning aims to infer new knowledge from existing knowledge, with OWL ontologies serving as a standardized framework for organizing information. A key challenge in semantic reasoning is verifying ontology consistency. However,…

Artificial Intelligence · Computer Science 2025-04-29 Justin Mücke , Ansgar Scherp

Large semantic knowledge bases are grounded in factual knowledge. However, recent approaches to dense text representations (i.e. embeddings) do not efficiently exploit these resources. Dense and robust representations of documents are…

Artificial Intelligence · Computer Science 2024-10-01 Boshko Koloski , Senja Pollak , Roberto Navigli , Blaž Škrlj

Ontologies are traditionally expressed in the Web Ontology Language (OWL), that provides a syntax for expressing taxonomies with axioms regulating class membership. The semantics of OWL, based on Description Logic (DL), allows for the use…

Information Theory · Computer Science 2023-09-07 Veronika Heimsbakk , Kristian Torkelsen

In ontology-mediated query answering, access to incomplete data sources is mediated by a conceptual layer constituted by an ontology, which can be formulated in a description logic (DL) or using existential rules. In the literature, there…

Logic in Computer Science · Computer Science 2022-08-31 Christian Alrabbaa , Stefan Borgwardt , Patrick Koopmann , Alisa Kovtunova

Ontology is a popular method for knowledge representation in different domains, including the legal domain, and description logics (DL) is commonly used as its description language. To handle reasoning based on inconsistent DL-based legal…

Artificial Intelligence · Computer Science 2022-09-20 Zhe Yu , Yiwei Lu

It has been reliably shown that the similarity of word embeddings obtained from popular neural models such as BERT approximates effectively a form of semantic similarity of the meaning of those words. It is therefore natural to wonder if…

Artificial Intelligence · Computer Science 2024-08-02 Mathieu d'Aquin , Emmanuel Nauer

We introduce $\mathcal{DLR}^+$, an extension of the n-ary propositionally closed description logic $\mathcal{DLR}$ to deal with attribute-labelled tuples (generalising the positional notation), projections of relations, and global and local…

Artificial Intelligence · Computer Science 2017-07-27 Alessandro Artale , Enrico Franconi , Rafael Peñaloza , Francesco Sportelli

In this position paper we present a new approach for discovering some special classes of assertional knowledge in the text by using large RDF repositories, resulting in the extraction of new non-taxonomic ontological relations. Also we use…

Information Retrieval · Computer Science 2013-08-06 Meisam Booshehri , Abbas Malekpour , Peter Luksch , Kamran Zamanifar , Shahdad Shariatmadari

The usefulness of semantic technologies in the context of security has been demonstrated many times, e.g., for processing certification evidence, log files, and creating security policies. Integrating semantic technologies, like ontologies,…

Software Engineering · Computer Science 2025-02-12 Christian Banse , Angelika Schneider , Immanuel Kunz

Concept Induction refers to the problem of creating complex Description Logic class descriptions (i.e., TBox axioms) from instance examples (i.e., ABox data). In this paper we look particularly at the case where both a set of positive and a…

Artificial Intelligence · Computer Science 2018-12-11 Md Kamruzzaman Sarker , Pascal Hitzler

Ontology development is a non-trivial task requiring expertise in the chosen ontological language. We propose a method for making the content of ontologies more transparent by presenting, through the use of natural language generation,…

Artificial Intelligence · Computer Science 2013-12-11 Shao Fen Liang , Donia Scott , Robert Stevens , Alan Rector
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