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PyPOTS is an open-source Python library dedicated to data mining and analysis on multivariate partially-observed time series with missing values. Particularly, it provides easy access to diverse algorithms categorized into five tasks:…

Machine Learning · Computer Science 2025-07-10 Wenjie Du , Yiyuan Yang , Linglong Qian , Jun Wang , Qingsong Wen

Monte Carlo simulations are based on the manipulation of random numbers to evaluate probable outcomes, with applicability in a variety of different fields. By assigning probabilities, which can be determined a priori, to various events, it…

Physics Education · Physics 2022-01-03 Parasuraman Swaminathan

Modern large scale cosmological hydrodynamic simulations require robust tools capable of analysing their data outputs in a parallel and efficient manner. We introduce SOAP (Spherical Overdensity and Aperture Processor), a Python package…

Instrumentation and Methods for Astrophysics · Physics 2025-07-31 Robert McGibbon , John C. Helly , Joop Schaye , Matthieu Schaller , Bert Vandenbroucke

PetroFit is an open-source Python package, based on Astropy and Photutils, that can calculate Petrosian profiles and fit galaxy images. It offers end-to-end tools for making accurate photometric measurements, estimating morphological…

Instrumentation and Methods for Astrophysics · Physics 2022-04-19 Robel Geda , Steven Crawford , Lucas R. Hunt , Matthew A. Bershady , Erik J. Tollerud , Solohery M. Randriamampandry

With the development of widely available commercial eye trackers, the use of eye tracking and pupillometry have become prevalent tools in cognitive research, both in industry and academia. However, dealing with pupil recordings often proves…

Signal Processing · Electrical Eng. & Systems 2020-11-11 Helia Relaño-Iborra , Per Bækgaard

We present an automated approach to detect and extract information from the astronomical datasets on the shapes of such objects as galaxies, star clusters and, especially, elongated ones such as the gravitational lenses. First, the…

Instrumentation and Methods for Astrophysics · Physics 2019-09-10 S. S. Mirzoyan , H. Khachatryan , G. Yegorian , V. G. Gurzadyan

We propose a novel technique to refine the modelling of galaxy clusters mass distribution using gravitational lensing. The idea is to combine the strengths of both "parametric" and "non-parametric" methods to improve the quality of the fit.…

Cosmology and Nongalactic Astrophysics · Physics 2009-11-13 Eric Jullo , Jean-Paul Kneib

PySensors is a Python package for selecting and placing a sparse set of sensors for classification and reconstruction tasks. Specifically, PySensors implements algorithms for data-driven sparse sensor placement optimization for…

Signal Processing · Electrical Eng. & Systems 2021-03-01 Brian M. de Silva , Krithika Manohar , Emily Clark , Bingni W. Brunton , Steven L. Brunton , J. Nathan Kutz

The gravitational lensing signal produced by a galaxy or a galaxy cluster is determined by its total matter distribution, providing us with a way to directly constrain their dark matter content. State-of-the-art numerical simulations…

Cosmology and Nongalactic Astrophysics · Physics 2023-11-27 Giulia Despali , Felix M. Heinze , Claudio Mastromarino

We introduce GalaxyGenius, a Python package designed to produce synthetic galaxy images tailored to different telescopes based on hydrodynamical simulations. Its implementation will support and advance research on galaxies in the era of…

Instrumentation and Methods for Astrophysics · Physics 2025-08-13 Xingchen Zhou , Hang Yang , Nan Li , Qi Xiong , Furen Deng , Xian-Min Meng , Renhao Ye , Shiyin Shen , Peng Wei , Qifan Cui , Zizhao He , Ayodeji Ibitoye , Chengliang Wei , Yuedong Fang

This paper presents a system which creates and visualizes probabilistic semantic links between concepts in a thesaurus and classes in a classification system. For creating the links, we build on the Polylingual Labeled Topic Model (PLL-TM).…

Artificial Intelligence · Computer Science 2016-03-22 Lisa Posch , Philipp Schaer , Arnim Bleier , Markus Strohmaier

This paper describes a novel Python package, named causalgraph, for modeling and saving causal graphs embedded in knowledge graphs. The package has been designed to provide an interface between causal disciplines such as causal discovery…

Artificial Intelligence · Computer Science 2023-01-23 Sven Pieper , Carl Willy Mehling , Dominik Hirsch , Tobias Lüke , Steffen Ihlenfeldt

We investigate gravitational microlensing of point-like lenses surrounded by diffuse gas clouds. Besides gravitational bending, one must also consider refraction and absorption phenomena. According to the cloud density, the light curves may…

Astrophysics · Physics 2009-11-07 V. Bozza , Ph. Jetzer , L. Mancini , G. Scarpetta

The use of Python is noticeably growing among the scientific community, and Astronomy is not an exception. The power of Python consists of being an extremely versatile high-level language, easy to program that combines both traditional…

Instrumentation and Methods for Astrophysics · Physics 2018-07-16 Daniel M. Faes

We introduce milearn, a Python package for multi-instance learning (MIL) that follows the familiar scikit-learn fit/predict interface while providing a unified framework for both classical and neural-network-based MIL algorithms for…

Machine Learning · Computer Science 2025-12-02 Dmitry Zankov , Pavlo Polishchuk , Michal Sobieraj , Mario Barbatti

As a star orbits the center of its host galaxy, the trajectory is encompassed within a 3D toroid. The orbit probes all points in this toroid, unless its orbital frequencies exhibit integer ratios (commensurate frequencies), in which case a…

Astrophysics of Galaxies · Physics 2025-05-22 Subhadeep Sarkar , Michael S. Petersen

Line observations of young stellar objects (YSOs) at (sub)millimeter wavelengths provide essential information of gas kinematics in star and planet forming environments. For Class 0 and I YSOs, identification of Keplerian rotation is of…

Earth and Planetary Astrophysics · Physics 2023-11-15 Yusuke Aso , Jinshi Sai

A holographic microscope captures interference patterns, or holograms, that encode three-dimensional (3D) information about the object being viewed. Computation is essential to extracting that 3D information. By wrapping low-level…

Image and Video Processing · Electrical Eng. & Systems 2018-06-04 Solomon Barkley , Thomas G. Dimiduk , Jerome Fung , David M. Kaz , Vinothan N. Manoharan , Ryan McGorty , Rebecca W. Perry , Anna Wang

Understanding the behavior of learned classifiers is an important task, and various black-box explanations, logical reasoning approaches, and model-specific methods have been proposed. In this paper, we introduce probabilistic sufficient…

Machine Learning · Computer Science 2021-05-24 Eric Wang , Pasha Khosravi , Guy Van den Broeck

To estimate cosmological parameters from a given dataset, we need to construct a likelihood function, which sometimes has a complicated functional form. We introduce the copula, a mathematical tool to construct an arbitrary multivariate…

Cosmology and Nongalactic Astrophysics · Physics 2011-02-25 Masanori Sato , Kiyotomo Ichiki , Tsutomu T. Takeuchi