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Jupyter Notebook is the tool of choice of many data scientists in the early stages of ML workflows. The notebook format, however, has been criticized for inducing bad programming practices; indeed, researchers have already shown that…

Software Engineering · Computer Science 2022-05-25 Luigi Quaranta , Fabio Calefato , Filippo Lanubile

This paper presents Tyche, a Python library to facilitate probabilistic reasoning in uncertain worlds through the construction, querying, and learning of belief models. Tyche uses aleatoric description logic (ADL), which provides…

Artificial Intelligence · Computer Science 2022-08-23 Padraig X. Lamont

Most particle induced X-ray emission (PIXE) data analysis codes are not focused on handling multilayered samples. We have developed an open-source library called "LibCPIXE", for PIXE data analysis. It is written in standard C and implements…

Materials Science · Physics 2007-07-18 C. Pascual-Izarra , N. P. Barradas , M. A. Reis

Written in Python and utilising ParselTongue to interface with the Astronomical Image Processing System (AIPS), the e-MERLIN data reduction pipeline is intended to automate the procedures required in processing and calibrating radio…

Instrumentation and Methods for Astrophysics · Physics 2015-02-18 Megan Argo

We make Bayesian Additive Regression Networks (BARN) available as a Python package, \texttt{barmpy}, with documentation at \url{https://dvbuntu.github.io/barmpy/} for general machine learning practitioners. Our object-oriented design is…

Computation · Statistics 2024-04-09 Danielle Van Boxel

We re-examine the well-known discrepancy between ionic abundances determined via the analysis of recombination lines (RLs) and collisionally excited lines (CELs). We show that abundance variations can be mimicked in a {\it chemically…

Astrophysics of Galaxies · Physics 2015-05-13 Barbara Ercolano

PyMembrane is a software package for simulating liquid and elastic membranes using a discretisation of the continuum description based on unstructured triangulated two-dimensional meshes embedded in three-dimensional space. The package is…

Soft Condensed Matter · Physics 2023-08-25 D. A. Matoz-Fernandez , Siyu Li , Monica Olvera de la Cruz , Rastko Sknepnek

Pulgon-tools is an open-source software package providing building blocks for the analysis and modeling of quasi-one-dimensional (quasi-1D) periodic systems based on line-group theory. While mature libraries exist for space-group detection…

Computational Physics · Physics 2026-03-31 Yu-Jie Cen , Sandro Wieser , Georg K. H. Madsen , Jesús Carrete

QC Lab is an open-source Python package for QC dynamics simulations aimed to promote the development of QC algorithms, and their application to a wide variety of relevant model problems. It follows a modular design that facilitates…

Chemical Physics · Physics 2025-10-28 Alex Krotz , Ethan Byrd , Ken Miyazaki , Roel Tempelaar

The open-source PyNX toolkit [Favre-Nicolin et al (2011) arXiv:1010.2641, Mandula et al (2016)] has been extended to provide tools for coherent X-ray imaging data analysis and simulation. All calculations can be executed on graphical…

We present a numerical code to simulate maps of Galactic emission in intensity and polarization at microwave frequencies, aiding in the design of Cosmic Microwave Background experiments. This Python code builds on existing efforts to…

Cosmology and Nongalactic Astrophysics · Physics 2017-06-21 Ben Thorne , Jo Dunkley , David Alonso , Sigurd Naess

We present version 10 of the CHIANTI package. In this release, we provide updated atomic models for several helium-like ions and for all the ions of the beryllium, carbon and magnesium isoelectronic sequences that are abundant in…

Atomic Physics · Physics 2021-03-10 G. Del Zanna , K. P. Dere , P. R. Young , E. Landi

Characterizing the temporal variability of astrophysical sources is key to understanding the underlying physical processes driving their emissions. This work introduces a gammapy_SyLC, a Python package that offers tools to simulate and fit…

High Energy Astrophysical Phenomena · Physics 2025-03-19 Claudio Galelli

Solving differential equations is a critical challenge across a host of domains. While many software packages efficiently solve these equations using classical numerical approaches, there has been less effort in developing a library for…

Machine Learning · Computer Science 2025-02-19 Shuheng Liu , Pavlos Protopapas , David Sondak , Feiyu Chen

Additive models offer accurate and interpretable predictions for tabular data, a critical tool for statistical modeling. Recent advances in Neural Additive Models (NAMs) allow these models to handle complex machine learning tasks, including…

Machine Learning · Computer Science 2025-03-12 Mike Van Ness , Madeleine Udell

PySDM is an open-source Python package for simulating the dynamics of particles undergoing condensational and collisional growth, interacting with a fluid flow and subject to chemical composition changes. It is intended to serve as a…

Machine learning solutions are very popular in the field of chemoinformatics, where they have numerous applications, such as novel drug discovery or molecular property prediction. Molecular fingerprints are algorithms commonly used for…

Quantitative Methods · Quantitative Biology 2024-04-01 Michał Szafarczyk , Piotr Ludynia , Przemysław Kukla

ruptures is a Python library for offline change point detection. This package provides methods for the analysis and segmentation of non-stationary signals. Implemented algorithms include exact and approximate detection for various…

Computation · Statistics 2018-01-04 Charles Truong , Laurent Oudre , Nicolas Vayatis

MatchingTools is a Python library for doing symbolic calculations in effective field theory. It provides the tools to construct general models by defining their field content and their interaction Lagrangian. Once a model is given, the…

High Energy Physics - Phenomenology · Physics 2018-08-09 Juan C. Criado

Galactic electron density distribution models are crucial tools for estimating the impact of the ionised interstellar medium on the impulsive signals from radio pulsars and fast radio bursts. The two prevailing Galactic electron density…

Astrophysics of Galaxies · Physics 2021-08-18 Danny C. Price , Adam Deller , Chris Flynn
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