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Related papers: Turing chemotactic instability in an HIV model

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We have developed a mathematical model for in-host virus dynamics that includes spatial chemotaxis and diffusion across a two dimensional surface representing the vaginal or rectal epithelium at primary HIV infection. A linear stability…

Quantitative Methods · Quantitative Biology 2016-03-07 Ognjen Stancevic , Christopher Angstmann , John M. Murray , Bruce I. Henry

This paper aims to investigate a reaction-diffusion model which describes in-host infection for Mycobacterium tuberculosis (Mtb) allowing random motion (i.e. linear diffusion) and chemotaxis (i.e. non-linear diffusion) of macrophages and…

Populations and Evolution · Quantitative Biology 2024-10-16 C. Accarino , R. Accarino , F. Capone , R. De Luca , L. Fiorentino , G. Massa

Symmetry-breaking instabilities play an important role in understanding the mechanisms underlying the diversity of patterns observed in nature, such as in Turing's reaction--diffusion theory, which connects cellular signalling and transport…

Pattern Formation and Solitons · Physics 2023-12-25 Andrew L. Krause , Eamonn A. Gaffney , Thomas Jun Jewell , Václav Klika , Benjamin J. Walker

We will study a mathematical model of the human immunodeficiency virus (HIV) infection in the presence of combination therapy that includes within-host infectious dynamics. The deterministic model requires us to analyze asymptotic stability…

Populations and Evolution · Quantitative Biology 2017-09-04 Majid Jaberi Douraki

The study of pattern-forming instabilities in reaction-diffusion systems on growing or otherwise time-dependent domains arises in a variety of settings, including applications in developmental biology, spatial ecology, and experimental…

Pattern Formation and Solitons · Physics 2022-07-11 Robert A. Van Gorder , Václav Klika , Andrew L. Krause

Turing instabilities for a two species reaction-diffusion systems is studied under anisotropic diffusion. More specifically, the diffusion constants which characterize the ability of the species to relocate in space are direction sensitive.…

Statistical Mechanics · Physics 2015-09-30 Daniel M. Busiello , Gwendoline Planchon , Malbor Asllani , Timoteo Carletti , Duccio Fanelli

Motivated by bacterial chemotaxis and multi-species ecological interactions in heterogeneous environments, we study a general one-dimensional reaction-cross-diffusion system in the presence of spatial heterogeneity in both transport and…

Pattern Formation and Solitons · Physics 2023-03-08 Eamonn A. Gaffney , Andrew L. Krause , Philip K. Maini , Chenyuan Wang

A reaction-diffusion Leslie-Gower predator-prey model, incorporating the fear effect and prey refuge, with Beddington-DeAngelis functional response, is introduced. A qualitative analysis of the solutions of the model and the stability…

Populations and Evolution · Quantitative Biology 2023-02-08 Florinda Capone , Roberta De Luca , Isabella Torcicollo

Pattern formation from homogeneity is well-studied, but less is known concerning symmetry-breaking instabilities in heterogeneous media. It is nontrivial to separate observed spatial patterning due to inherent spatial heterogeneity from…

Pattern Formation and Solitons · Physics 2019-12-10 Andrew L. Krause , Václav Klika , Thomas E. Woolley , Eamonn A. Gaffney

We consider a Human Immunodeficiency Virus (HIV) model with a logistic growth term and continue the analysis of the previous article [6]. We now take the viral diffusion in a two-dimensional environment. The model consists of two ODEs for…

Analysis of PDEs · Mathematics 2012-11-02 Claude-Michel Brauner , Xinyue Fan , Luca Lorenzi

Recent clinical studies have shown that HIV disease pathogenesis can depend strongly on many factors at the time of transmission, including the strength of the initial viral load and the local availability of CD4+ T-cells. In this article,…

Populations and Evolution · Quantitative Biology 2019-10-15 Stephen Pankavich , Nathan Neri , Deborah Shutt

This research gives a thorough examination of an HIV infection model that includes quiescent cells and immune response dynamics in the host. The model, represented by a system of ordinary differential equations, captures the complex…

Populations and Evolution · Quantitative Biology 2025-03-04 Ibrahim Nali , Attila Dénes , Abdessamad Tridane , Xueyong Zhou

We study within-host HIV dynamics using a three--component nonlinear ordinary differential equation model for healthy CD4$^{+}$ T cells, infected CD4$^{+}$ T cells, and free virus. In addition to the baseline model without treatment, we…

Numerical Analysis · Mathematics 2025-12-16 Abdul Rab

Ratio-dependent predator-prey models have been increasingly favored by field ecologists where predator-prey interactions have to be taken into account the process of predation search. In this paper we study the conditions of the existence…

Dynamical Systems · Mathematics 2016-03-07 Shaban Aly , Imbunm Kim , Dongwoo Sheen

Reaction-diffusion processes across layered media arise in several scientific domains such as pattern-forming E. coli on agar substrates, epidermal-mesenchymal coupling in development, and symmetry-breaking in cell polarisation. We develop…

Pattern Formation and Solitons · Physics 2020-09-18 Andrew L. Krause , Václav Klika , Jacob Halatek , Paul K. Grant , Thomas E. Woolley , Neil Dalchau , Eamonn A. Gaffney

Mechanisms of pattern formation---of which the Turing instability is an archetype---constitute an important class of dynamical processes occurring in biological, ecological and chemical systems. Recently, it has been shown that the Turing…

Disordered Systems and Neural Networks · Physics 2019-06-19 Sayat Mimar , Mariamo Mussa Juane , Juyong Park , Alberto P. Munuzuri , Gourab Ghoshal

The emergence of stable disordered patterns in reactive system on spatially homogenous substrate is studied in the context of vegetation patterns in the semi-arid climatic zone. It is shown that reaction-diffusion systems that allow for…

Pattern Formation and Solitons · Physics 2009-11-11 Alon Manor , Nadav M. Shnerb

The Turing instability paradigm is revisited in the context of a multispecies diffusion scheme derived from a self-consistent microscopic formulation. The analysis is developed with reference to the case of two species. These latter share…

Biological Physics · Physics 2012-07-02 Duccio Fanelli , Claudia Cianci , Francesca Di Patti

The Turing instability is a paradigmatic route to patterns formation in reaction-diffusion systems. Following a diffusion-driven instability, homogeneous fixed points can become unstable when subject to external perturbation. As a…

Pattern Formation and Solitons · Physics 2015-09-02 Joseph D. Challenger , Raffaella Burioni , Duccio Fanelli

Long after Turing's seminal Reaction-Diffusion (RD) model, the elegance of his fundamental equations alleviated much of the skepticism surrounding pattern formation. Though Turing model is a simplification and an idealization, it is one of…

Machine Learning · Computer Science 2020-12-09 Litu Rout
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