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The Longest Common Subsequence (LCS) is the problem of finding a subsequence among a set of strings that has two properties of being common to all and is the longest. The LCS has applications in computational biology and text editing, among…

Artificial Intelligence · Computer Science 2023-06-07 Alireza Abdi , Masih Hajsaeedi , Mohsen Hooshmand

The Longest Common Subsequence Problem (LCS) deals with finding the longest subsequence among a given set of strings. The LCS problem is an NP-hard problem which makes it a target for lots of effort to find a better solution with heuristics…

Data Structures and Algorithms · Computer Science 2022-06-24 Alireza Abdi , Mohsen Hooshmand

At CPM 2017, Castelli et al. define and study a new variant of the Longest Common Subsequence Problem, termed the Longest Filled Common Subsequence Problem (LFCS). For the LFCS problem, the input consists of two strings $A$ and $B$ and a…

Data Structures and Algorithms · Computer Science 2019-08-06 Radu Stefan Mincu , Alexandru Popa

Finding the common subsequences of $L$ multiple strings has many applications in the area of bioinformatics, computational linguistics, and information retrieval. A well-known result states that finding a Longest Common Subsequence (LCS)…

Data Structures and Algorithms · Computer Science 2020-09-09 Jin Cao , Dewei Zhong

This paper addresses the Variable Gapped Longest Common Subsequence (VGLCS) problem, a generalization of the classical LCS problem involving flexible gap constraints between consecutive solutions' characters. The problem arises in molecular…

Artificial Intelligence · Computer Science 2026-04-22 Marko Djukanović , Nikola Balaban , Christian Blum , Aleksandar Kartelj , Sašo Džeroski , Žiga Zebec

This work addresses the uniform parallel machine scheduling problem within an optimistic bilevel optimization framework. The leader seeks to minimize the weighted number of tardy jobs, while the follower aims to minimize the total…

Optimization and Control · Mathematics 2026-05-20 Quentin Schau , Federico Della Croce , Olivier Ploton , Vincent t'Kindt

We introduce Limited Rollout Beam Search (LRBS), a beam search strategy for deep reinforcement learning (DRL) based combinatorial optimization improvement heuristics. Utilizing pre-trained models on the Euclidean Traveling Salesperson…

Machine Learning · Computer Science 2024-12-16 Federico Julian Camerota Verdù , Lorenzo Castelli , Luca Bortolussi

Finding the longest common subsequence in $k$-length substrings (LCS$k$) is a recently proposed problem motivated by computational biology. This is a generalization of the well-known LCS problem in which matching symbols from two sequences…

Data Structures and Algorithms · Computer Science 2013-11-20 Sebastian Deorowicz , Szymon Grabowski

Longest Common Subsequence ($LCS$) deals with the problem of measuring similarity of two strings. While this problem has been analyzed for decades, the recent interest stems from a practical observation that considering single characters is…

Data Structures and Algorithms · Computer Science 2018-05-25 Filip Pavetić , Ivan Katanić , Gustav Matula , Goran Žužić , Mile Šikić

Large language models (LLMs) demonstrate impressive few-shot learning capabilities, but their performance varies widely based on the sequence of in-context examples. Key factors influencing this include the sequence's length, composition,…

Computation and Language · Computer Science 2025-03-12 Xiang Gao , Ankita Sinha , Kamalika Das

The problem of finding the longest common subsequence (LCS) for a set of sequences is a very interesting and challenging problem in computer science. This problem is NP-complete, but because of its importance, many heuristic algorithms have…

Data Structures and Algorithms · Computer Science 2009-06-30 Kang Ning

For a set of mulitple sequences, their patterns,Longest Common Subsequences (LCS) and Shortest Common Supersequences (SCS) represent different aspects of these sequences profile, and they can all be used for biological sequence comparisons…

Data Structures and Algorithms · Computer Science 2016-11-17 Kang Ning , Hoong Kee Ng , Hon Wai Leong

As one popular modeling approach for end-to-end speech recognition, attention-based encoder-decoder models are known to suffer the length bias and corresponding beam problem. Different approaches have been applied in simple beam search to…

Audio and Speech Processing · Electrical Eng. & Systems 2023-10-24 Wei Zhou , Ralf Schlüter , Hermann Ney

Anytime heuristic search algorithms try to find a (potentially suboptimal) solution as quickly as possible and then work to find better and better solutions until an optimal solution is obtained or time is exhausted. The most widely-known…

Artificial Intelligence · Computer Science 2023-12-21 Sofia Lemons , Wheeler Ruml , Robert C. Holte , Carlos Linares López

Dominating Set is a well-known combinatorial optimization problem which finds application in computational biology or mobile communication. Because of its $\mathrm{NP}$-hardness, one often turns to heuristics for good solutions. Many such…

Data Structures and Algorithms · Computer Science 2026-01-21 Hendrik Higl

Grouping problems aim to partition a set of items into multiple mutually disjoint subsets according to some specific criterion and constraints. Grouping problems cover a large class of important combinatorial optimization problems that are…

Artificial Intelligence · Computer Science 2016-04-04 Yangming Zhou , Jin-Kao Hao , Béatrice Duval

The integration of Large Language Models (LLMs) into evolutionary frameworks has established a new paradigm for automated heuristic discovery. Despite their promise, these methods typically search in the discrete space of program syntax,…

Artificial Intelligence · Computer Science 2026-05-19 Cheikh Ahmed , Mahdi Mostajabdaveh , Zirui Zhou

Longest common subsequence (LCS) is one of the most fundamental problems in combinatorial optimization. Apart from theoretical importance, LCS has enormous applications in bioinformatics, revision control systems, and data comparison…

Data Structures and Algorithms · Computer Science 2020-03-17 MohammadTaghi Hajiaghayi , Masoud Seddighin , Saeed Seddighin , Xiaorui Sun

We present a novel view that unifies two frameworks that aim to solve sequential prediction problems: learning to search (L2S) and recurrent neural networks (RNN). We point out equivalences between elements of the two frameworks. By…

Computation and Language · Computer Science 2016-07-19 Khanh Nguyen

This paper investigates the approximability of the Longest Common Subsequence (LCS) problem. The fastest algorithm for solving the LCS problem exactly runs in essentially quadratic time in the length of the input, and it is known that under…

Data Structures and Algorithms · Computer Science 2021-05-10 Shyan Akmal , Virginia Vassilevska Williams
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