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Related papers: The State of Julia for Scientific Machine Learning

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JuMP is an algebraic modeling language embedded in the Julia programming language. JuMP allows users to model optimization problems of a variety of kinds, including linear programming, integer programming, conic optimization, semidefinite…

Programming Languages · Computer Science 2023-03-21 Miles Lubin , Oscar Dowson , Joaquim Dias Garcia , Joey Huchette , Benoît Legat , Juan Pablo Vielma

Large language models (LLMs) have ushered in a new era for processing complex information in various fields, including science. The increasing amount of scientific literature allows these models to acquire and understand scientific…

Computation and Language · Computer Science 2024-08-21 Huy Quoc To , Ming Liu , Guangyan Huang

The number of Language Models (LMs) dedicated to processing scientific text is on the rise. Keeping pace with the rapid growth of scientific LMs (SciLMs) has become a daunting task for researchers. To date, no comprehensive surveys on…

Computation and Language · Computer Science 2024-02-01 Xanh Ho , Anh Khoa Duong Nguyen , An Tuan Dao , Junfeng Jiang , Yuki Chida , Kaito Sugimoto , Huy Quoc To , Florian Boudin , Akiko Aizawa

JuMP is an open-source modeling language that allows users to express a wide range of optimization problems (linear, mixed-integer, quadratic, conic-quadratic, semidefinite, and nonlinear) in a high-level, algebraic syntax. JuMP takes…

Optimization and Control · Mathematics 2017-05-08 Iain Dunning , Joey Huchette , Miles Lubin

The rapid evolution of artificial intelligence, especially through multi-modal large language models, has redefined user interactions, enabling responses that are contextually rich and human-like. As AI becomes an integral part of daily…

Human-Computer Interaction · Computer Science 2024-11-21 Weizhe Lin , Junxiao Shen

This paper proposes integrating Aspect-oriented Programming (AOP) into Julia, a language widely used in scientific and High-Performance Computing (HPC). AOP enhances software modularity by encapsulating cross-cutting concerns, such as…

Programming Languages · Computer Science 2024-12-30 Osamu Ishimura , Yoshihide Yoshimoto

Replacing ANSI C language with other modern programming languages such as Python or Java may be an actual debate topic in technical universities. Researchers whose primary interests are not in programming area seem to prefer modern and…

Computers and Society · Computer Science 2016-11-17 Lidia Dobrescu

We introduce CBXPy and ConsensusBasedX.jl, Python and Julia implementations of consensus-based interacting particle systems (CBX), which generalise consensus-based optimization methods (CBO) for global, derivative-free optimisation. The…

Optimization and Control · Mathematics 2024-12-04 Rafael Bailo , Alethea Barbaro , Susana N. Gomes , Konstantin Riedl , Tim Roith , Claudia Totzeck , Urbain Vaes

Connectivity across landscapes influences a wide range of conservation-relevant ecological processes, including species movements, gene flow, and the spread of wildfire, pests, and diseases. Recent improvements in remote sensing data…

Quantitative Methods · Quantitative Biology 2019-06-11 Ranjan Anantharaman , Kimberly Hall , Viral Shah , Alan Edelman

The use of programming languages can wax and wane across the decades. We examine the split-apply- combine pattern that is common in statistical computing, and consider how its invocation or implementation in languages like MATLAB and APL…

Programming Languages · Computer Science 2018-08-16 Jiahao Chen

As a scientific programming language, Julia strives for performance but also provides high-level productivity features. To avoid performance pathologies, Julia users are expected to adhere to a coding discipline that enables so-called type…

Programming Languages · Computer Science 2021-11-18 Artem Pelenitsyn , Julia Belyakova , Benjamin Chung , Ross Tate , Jan Vitek

Large Language Models (LLMs) have emerged as a transformative power in enhancing natural language comprehension, representing a significant stride toward artificial general intelligence. The application of LLMs extends beyond conventional…

We present \texttt{MathOptAI.jl}, an open-source Julia library for embedding trained machine learning predictors into a JuMP model. \texttt{MathOptAI.jl} can embed a wide variety of neural networks, decision trees, and Gaussian Processes…

Machine Learning · Computer Science 2026-05-26 Oscar Dowson , Robert B Parker , Russel Bent

We introduce Metatheory.jl: a lightweight and performant general purpose symbolics and metaprogramming framework meant to simplify the act of writing complex Julia metaprograms and to significantly enhance Julia with a native term rewriting…

Programming Languages · Computer Science 2021-04-14 Alessandro Cheli

We present Trixi.jl, a Julia package for adaptive high-order numerical simulations of hyperbolic partial differential equations. Utilizing Julia's strengths, Trixi.jl is extensible, easy to use, and fast. We describe the main design choices…

Mathematical Software · Computer Science 2022-01-19 Hendrik Ranocha , Michael Schlottke-Lakemper , Andrew R. Winters , Erik Faulhaber , Jesse Chan , Gregor J. Gassner

In emerging scientific computing environments, matrix computations of increasing size and complexity are increasingly becoming prevalent. However, contemporary matrix language implementations are insufficient in their support for efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-11 Jay Hwan Lee , Yeonsoo Kim , Younghyun Ryu , Wasuwee Sodsong , Hyunjun Jeon , Jinsik Park , Bernd Burgstaller , Bernhard Scholz

We present an open source computational framework geared towards the efficient numerical investigation of open quantum systems written in the Julia programming language. Built exclusively in Julia and based on standard quantum optics…

Quantum Physics · Physics 2018-03-14 Sebastian Krämer , David Plankensteiner , Laurin Ostermann , Helmut Ritsch

This study introduces a novel software tool leveraging large language model (LLM) prompts, designed to automate the generation of academic articles from Python code a significant advancement in the fields of biomedical informatics and…

Human-Computer Interaction · Computer Science 2024-04-30 Jeremy R. Harper

Biclustering is a data mining technique which searches for local patterns in numeric tabular data with main application in bioinformatics. This technique has shown promise in multiple areas, including development of biomarkers for cancer,…

Machine Learning · Computer Science 2021-05-05 Paweł Renc , Patryk Orzechowski , Aleksander Byrski , Jarosław Wąs , Jason H. Moore

Python is a popular, widely used, and general-purpose programming language. In spite of its ever-growing community, researchers have not performed much analysis on Python's topics, trends, and technologies which provides insights for…

Software Engineering · Computer Science 2020-04-15 Hamed Tahmooresi , Abbas Heydarnoori , Alireza Aghamohammadi