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Advancements in technologies related to working with omics data require novel computation methods to fully leverage information and help develop a better understanding of human diseases. This paper studies the effects of introducing graph…

Genomics · Quantitative Biology 2023-10-17 Nishant Rajadhyaksha , Aarushi Chitkara

We introduce a self-supervised approach for learning node and graph level representations by contrasting structural views of graphs. We show that unlike visual representation learning, increasing the number of views to more than two or…

Machine Learning · Computer Science 2020-06-11 Kaveh Hassani , Amir Hosein Khasahmadi

Reliable fault detection is an essential requirement for safe and efficient operation of complex mechanical systems in various industrial applications. Despite the abundance of existing approaches and the maturity of the fault detection…

Signal Processing · Electrical Eng. & Systems 2024-08-19 Tianfu Li , Chuang Sun , Ruqiang Yan , Xuefeng Chen

Contrastive learning (CL) has become a dominant paradigm for self-supervised hypergraph learning, enabling effective training without costly labels. However, node entities in real-world hypergraphs are often associated with rich textual…

Machine Learning · Computer Science 2026-05-26 Mengting Pan , Fan Li , Chen Chen , Xiaoyang Wang , Wenjie Zhang

Although graph neural networks (GNNs) have achieved impressive achievements in graph classification, they often need abundant task-specific labels, which could be extensively costly to acquire. A credible solution is to explore additional…

Machine Learning · Computer Science 2025-07-15 Nan Yin , Li Shen , Mengzhu Wang , Long Lan , Zeyu Ma , Chong Chen , Xian-Sheng Hua , Xiao Luo

We propose GC-VASE, a graph convolutional-based variational autoencoder that leverages contrastive learning for subject representation learning from EEG data. Our method successfully learns robust subject-specific latent representations…

Signal Processing · Electrical Eng. & Systems 2025-01-29 Aditya Mishra , Ahnaf Mozib Samin , Ali Etemad , Javad Hashemi

Graph contrastive learning (GCL) has become a powerful tool for learning graph data, but its scalability remains a significant challenge. In this work, we propose a simple yet effective training framework called Structural Compression…

Machine Learning · Computer Science 2024-05-10 Shengzhong Zhang , Wenjie Yang , Xinyuan Cao , Hongwei Zhang , Zengfeng Huang

Graph Contrastive Learning (GCL) aims to self-supervised learn low-dimensional graph representations, primarily through instance discrimination, which involves manually mining positive and negative pairs from graphs, increasing the…

Machine Learning · Computer Science 2025-03-26 Yongqi Huang , Jitao Zhao , Dongxiao He , Di Jin , Yuxiao Huang , Zhen Wang

Graph augmentation has received great attention in recent years for graph contrastive learning (GCL) to learn well-generalized node/graph representations. However, mainstream GCL methods often favor randomly disrupting graphs for…

Machine Learning · Computer Science 2024-05-03 Shiyin Tan , Dongyuan Li , Renhe Jiang , Ying Zhang , Manabu Okumura

Graph representation learning has attracted lots of attention recently. Existing graph neural networks fed with the complete graph data are not scalable due to limited computation and memory costs. Thus, it remains a great challenge to…

Machine Learning · Computer Science 2020-11-24 Yizhu Jiao , Yun Xiong , Jiawei Zhang , Yao Zhang , Tianqi Zhang , Yangyong Zhu

In recent years, numerous graph generative models (GGMs) have been proposed. However, evaluating these models remains a considerable challenge, primarily due to the difficulty in extracting meaningful graph features that accurately…

Machine Learning · Computer Science 2025-03-18 Chengen Wang , Murat Kantarcioglu

The advent of graph convolutional network (GCN)-based multi-view learning provides a powerful framework for integrating structural information from heterogeneous views, enabling effective modeling of complex multi-view data. However,…

Machine Learning · Computer Science 2025-12-17 Huaiyuan Xiao , Fadi Dornaika , Jingjun Bi

Graph neural networks (GNNs) have recently emerged as an effective approach to model neighborhood signals in collaborative filtering. Towards this research line, graph contrastive learning (GCL) demonstrates robust capabilities to address…

Information Retrieval · Computer Science 2024-07-22 Xinzhou Jin , Jintang Li , Liang Chen , Chenyun Yu , Yuanzhen Xie , Tao Xie , Chengxiang Zhuo , Zang Li , Zibin Zheng

Variational autoencoders (VAEs) suffer from posterior collapse, where the powerful neural networks used for modeling and inference optimize the objective without meaningfully using the latent representation. We introduce inference critics…

Machine Learning · Computer Science 2022-07-21 Sachit Menon , David Blei , Carl Vondrick

In the rapidly evolving field of self-supervised learning on graphs, generative and contrastive methodologies have emerged as two dominant approaches. Our study focuses on masked feature reconstruction (MFR), a generative technique where a…

Machine Learning · Computer Science 2025-12-16 Jianyuan Bo , Yuan Fang

Albeit having gained significant progress lately, large-scale graph representation learning remains expensive to train and deploy for two main reasons: (i) the repetitive computation of multi-hop message passing and non-linearity in graph…

Machine Learning · Computer Science 2023-03-10 Zhenshuo Zhang , Yun Zhu , Haizhou Shi , Siliang Tang

Electrocardiogram (ECG) analysis is foundational for cardiovascular disease diagnosis, yet the performance of deep learning models is often constrained by limited access to annotated data. Self-supervised contrastive learning has emerged as…

Machine Learning · Computer Science 2025-08-22 Yi Yuan , Joseph Van Duyn , Runze Yan , Zhuoyi Huang , Sulaiman Vesal , Sergey Plis , Xiao Hu , Gloria Hyunjung Kwak , Ran Xiao , Alex Fedorov

We consider the problem of image representation for the tasks of unsupervised learning and semi-supervised learning. In those learning tasks, the raw image vectors may not provide enough representation for their intrinsic structures due to…

Machine Learning · Computer Science 2014-02-20 Yiyi Liao , Yue Wang , Yong Liu

Graph autoencoders (GAE) and variational graph autoencoders (VGAE) emerged as two powerful groups of unsupervised node embedding methods, with various applications to graph-based machine learning problems such as link prediction and…

Machine Learning · Computer Science 2025-06-19 Guillaume Salha-Galvan

Graph-level representations (and clustering/classification based on these representations) are required in a variety of applications. Examples include identifying malicious network traffic, prediction of protein properties, and many others.…

Machine Learning · Computer Science 2024-11-20 Xiang Li , Gagan Agrawal , Rajiv Ramnath , Ruoming Jin
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