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Models based on machine learning can enable accurate and fast molecular property predictions, which is of interest in drug discovery and material design. Various supervised machine learning models have demonstrated promising performance,…

Machine Learning · Computer Science 2022-12-15 Jerret Ross , Brian Belgodere , Vijil Chenthamarakshan , Inkit Padhi , Youssef Mroueh , Payel Das

Recently, text-to-molecule models have shown great potential across various chemical applications, e.g., drug-discovery. These models adapt language models to molecular data by representing molecules as sequences of atoms. However, they…

Computation and Language · Computer Science 2025-09-18 Seojin Kim , Hyeontae Song , Jaehyun Nam , Jinwoo Shin

Partial dental point clouds often suffer from large missing regions caused by occlusion and limited scanning views, which bias encoder-only global features and force decoders to hallucinate structures. We propose a retrieval-augmented…

Computer Vision and Pattern Recognition · Computer Science 2025-12-04 Jianan Sun , Yukang Huang , Dongzhihan Wang , Mingyu Fan

Large-scale pre-training methodologies for chemical language models represent a breakthrough in cheminformatics. These methods excel in tasks such as property prediction and molecule generation by learning contextualized representations of…

Machine Learning · Computer Science 2025-07-18 Eduardo Soares , Victor Shirasuna , Emilio Vital Brazil , Renato Cerqueira , Dmitry Zubarev , Kristin Schmidt

We propose a novel approach aimed at object and semantic scene completion from a partial scan represented as a 3D point cloud. Our architecture relies on three novel layers that are used successively within an encoder-decoder structure and…

Computer Vision and Pattern Recognition · Computer Science 2022-04-01 Yida Wang , David Joseph Tan , Nassir Navab , Federico Tombari

Recent advances in multimodal large language models (MLLMs) have enabled image-based question-answering capabilities. However, a key limitation is the use of CLIP as the visual encoder; while it can capture coarse global information, it…

Computer Vision and Pattern Recognition · Computer Science 2025-07-10 Vatsal Agarwal , Matthew Gwilliam , Gefen Kohavi , Eshan Verma , Daniel Ulbricht , Abhinav Shrivastava

In this work, we present Uni3DL, a unified model for 3D and Language understanding. Distinct from existing unified vision-language models in 3D which are limited in task variety and predominantly dependent on projected multi-view images,…

Computer Vision and Pattern Recognition · Computer Science 2023-12-07 Xiang Li , Jian Ding , Zhaoyang Chen , Mohamed Elhoseiny

We propose a novel approach to self-supervised learning of point cloud representations by differentiable neural rendering. Motivated by the fact that informative point cloud features should be able to encode rich geometry and appearance…

Computer Vision and Pattern Recognition · Computer Science 2023-10-27 Di Huang , Sida Peng , Tong He , Honghui Yang , Xiaowei Zhou , Wanli Ouyang

As two fundamental representation modalities of 3D objects, 3D point clouds and multi-view 2D images record shape information from different domains of geometric structures and visual appearances. In the current deep learning era,…

Computer Vision and Pattern Recognition · Computer Science 2023-06-16 Qijian Zhang , Junhui Hou , Yue Qian

Recent advancements in vision-language pre-training (e.g. CLIP) have shown that vision models can benefit from language supervision. While many models using language modality have achieved great success on 2D vision tasks, the joint…

Computer Vision and Pattern Recognition · Computer Science 2023-01-19 Rui Huang , Xuran Pan , Henry Zheng , Haojun Jiang , Zhifeng Xie , Shiji Song , Gao Huang

Masked point modeling has become a promising scheme of self-supervised pre-training for point clouds. Existing methods reconstruct either the original points or related features as the objective of pre-training. However, considering the…

Computer Vision and Pattern Recognition · Computer Science 2023-09-26 Qibo Qiu , Honghui Yang , Wenxiao Wang , Shun Zhang , Haiming Gao , Haochao Ying , Wei Hua , Xiaofei He

Multi-modal large language models (MLLMs) have shown remarkable progress in integrating visual and linguistic understanding. Recent efforts have extended these capabilities to 3D understanding through encoder-based architectures that rely…

Computer Vision and Pattern Recognition · Computer Science 2026-03-11 Sneha Paul , Zachary Patterson , Nizar Bouguila

Identifying local structural motifs and packing patterns of molecular solids is a challenging task for both simulation and experiment. We demonstrate two novel approaches to characterize local environments in different polymorphs of…

Materials Science · Physics 2024-04-02 Daisuke Kuroshima , Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

Large language models (LLMs) are introducing a paradigm shift in molecular discovery by enabling text-guided interaction with chemical spaces through natural language, symbolic notations, with emerging extensions to incorporate multi-modal…

Machine Learning · Computer Science 2025-05-23 Ziqing Wang , Kexin Zhang , Zihan Zhao , Yibo Wen , Abhishek Pandey , Han Liu , Kaize Ding

Point cloud (PC) processing tasks-such as completion, upsampling, denoising, and colorization-are crucial in applications like autonomous driving and 3D reconstruction. Despite substantial advancements, prior approaches often address each…

Computer Vision and Pattern Recognition · Computer Science 2025-08-22 Yi Du , Zhipeng Zhao , Shaoshu Su , Sharath Golluri , Haoze Zheng , Runmao Yao , Chen Wang

Computational methods that operate on three-dimensional molecular structure have the potential to solve important questions in biology and chemistry. In particular, deep neural networks have gained significant attention, but their…

Despite their ability to understand chemical knowledge, large language models (LLMs) remain limited in their capacity to propose novel molecules with desired functions (e.g., drug-like properties). In addition, the molecules that LLMs…

The goal of point cloud localization based on linguistic description is to identify a 3D position using textual description in large urban environments, which has potential applications in various fields, such as determining the location…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Yanlong Xu , Haoxuan Qu , Jun Liu , Wenxiao Zhang , Xun Yang

Since the advent of machine learning, interpretability has remained a persistent challenge, becoming increasingly urgent as generative models support high-stakes applications in drug and material discovery. Recent advances in large language…

Machine Learning · Computer Science 2025-12-10 Jaron Cohen , Alexander G. Hasson , Sara Tanovic

Significant interests have recently risen in leveraging sequence-based large language models (LLMs) for drug design. However, most current applications of LLMs in drug discovery lack the ability to comprehend three-dimensional (3D)…