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Fast data acquisition in Magnetic Resonance Imaging (MRI) is vastly in demand and scan time directly depends on the number of acquired k-space samples. Recently, the deep learning-based MRI reconstruction techniques were suggested to…

Computer Vision and Pattern Recognition · Computer Science 2019-03-20 Ali Pour Yazdanpanah , Onur Afacan , Simon K. Warfield

Many applications in computational and experimental fluid mechanics require effective methods for reconstructing the flow fields from limited sensor data. However, this task remains a significant challenge because the measurement operator,…

Fluid Dynamics · Physics 2024-11-22 Phong C. H. Nguyen , Joseph B. Choi , Quang-Trung Luu

Dynamic free-breathing fetal cardiac MRI is one of the most challenging modalities, which requires high temporal and spatial resolution to depict rapid changes in a small fetal heart. The ability of deep learning methods to recover…

Image and Video Processing · Electrical Eng. & Systems 2023-08-16 Denis Prokopenko , Kerstin Hammernik , Thomas Roberts , David F A Lloyd , Daniel Rueckert , Joseph V Hajnal

Deep learning networks are being developed in every stage of the MRI workflow and have provided state-of-the-art results. However, this has come at the cost of increased computation requirement and storage. Hence, replacing the networks…

Image and Video Processing · Electrical Eng. & Systems 2020-04-14 Balamurali Murugesan , Sricharan Vijayarangan , Kaushik Sarveswaran , Keerthi Ram , Mohanasankar Sivaprakasam

We propose a self-supervised feature learning assisted reconstruction (SSFL-Recon) framework for MRI reconstruction to address the limitation of existing supervised learning methods. Although recent deep learning-based methods have shown…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Siying Xu , Marcel Früh , Kerstin Hammernik , Andreas Lingg , Jens Kübler , Patrick Krumm , Daniel Rueckert , Sergios Gatidis , Thomas Küstner

Magnetic resonance imaging (MRI) is an essential diagnostic tool that suffers from prolonged scan times. Reconstruction methods can alleviate this limitation by recovering clinically usable images from accelerated acquisitions. In…

Image and Video Processing · Electrical Eng. & Systems 2023-01-09 Salman UH Dar , Şaban Öztürk , Muzaffer Özbey , Tolga Çukur

The study of neurodegenerative diseases relies on the reconstruction and analysis of the brain cortex from magnetic resonance imaging (MRI). Traditional frameworks for this task like FreeSurfer demand lengthy runtimes, while its accelerated…

Image and Video Processing · Electrical Eng. & Systems 2020-10-23 Rodrigo Santa Cruz , Leo Lebrat , Pierrick Bourgeat , Clinton Fookes , Jurgen Fripp , Olivier Salvado

We introduce SMURF, a scalable and unsupervised machine learning method for simultaneously segmenting vascular geometries and reconstructing velocity fields from 4D flow MRI data. SMURF models geometry and velocity fields using multilayer…

Medical Physics · Physics 2026-01-27 Atharva Hans , Abhishek Singh , Pavlos Vlachos , Ilias Bilionis

High spatiotemporal resolution dynamic magnetic resonance imaging (MRI) is a powerful clinical tool for imaging moving structures as well as to reveal and quantify other physical and physiological dynamics. The low speed of MRI necessitates…

Image and Video Processing · Electrical Eng. & Systems 2019-10-14 Yuhua Chen , Jaime L. Shaw , Yibin Xie , Debiao Li , Anthony G. Christodoulou

Acquiring fully-sampled MRI $k$-space data is time-consuming, and collecting accelerated data can reduce the acquisition time. Employing 2D Cartesian-rectilinear subsampling schemes is a conventional approach for accelerated acquisitions;…

Image and Video Processing · Electrical Eng. & Systems 2023-08-11 George Yiasemis , Clara I. Sánchez , Jan-Jakob Sonke , Jonas Teuwen

Reconstructing high-quality images from substantially undersampled k-space data for accelerated MRI presents a challenging ill-posed inverse problem. While supervised deep learning has revolutionized this field, it relies heavily on large…

Image and Video Processing · Electrical Eng. & Systems 2025-12-22 Xinzhe Luo , Yingzhen Li , Chen Qin

High spatial and temporal resolution across the whole brain is essential to accurately resolve neural activities in fMRI. Therefore, accelerated imaging techniques target improved coverage with high spatio-temporal resolution. Simultaneous…

Image and Video Processing · Electrical Eng. & Systems 2021-05-13 Omer Burak Demirel , Burhaneddin Yaman , Logan Dowdle , Steen Moeller , Luca Vizioli , Essa Yacoub , John Strupp , Cheryl A. Olman , Kâmil Uğurbil , Mehmet Akçakaya

Inspired by recent advances in deep learning, we propose a framework for reconstructing dynamic sequences of 2D cardiac magnetic resonance (MR) images from undersampled data using a deep cascade of convolutional neural networks (CNNs) to…

Computer Vision and Pattern Recognition · Computer Science 2017-11-27 Jo Schlemper , Jose Caballero , Joseph V. Hajnal , Anthony Price , Daniel Rueckert

Purpose: We aim to develop a robust 4D MRI method for large FOVs enabling the extraction of irregular respiratory motion that is readily usable with all MRI machines and thus applicable to support a wide range of interventional settings.…

Image and Video Processing · Electrical Eng. & Systems 2020-09-09 Gino Gulamhussene , Fabian Joeres , Marko Rak , Maciej Pech , Christian Hansen

Magnetic Resonance Image (MRI) acquisition is an inherently slow process which has spurred the development of two different acceleration methods: acquiring multiple correlated samples simultaneously (parallel imaging) and acquiring fewer…

Image and Video Processing · Electrical Eng. & Systems 2020-04-01 Anuroop Sriram , Jure Zbontar , Tullie Murrell , C. Lawrence Zitnick , Aaron Defazio , Daniel K. Sodickson

Four-dimensional Flow MRI enables non-invasive, time-resolved imaging of blood flow in three spatial dimensions, offering valuable insights into complex hemodynamics. However, its clinical utility is limited by low spatial resolution and…

Image and Video Processing · Electrical Eng. & Systems 2026-03-17 Aurélien de Turenne , Rémi Cart-Lamy , Denis Kouamé

MRI with multiple protocols is commonly used for diagnosis, but it suffers from a long acquisition time, which yields the image quality vulnerable to say motion artifacts. To accelerate, various methods have been proposed to reconstruct…

Image and Video Processing · Electrical Eng. & Systems 2020-04-09 Bo Zhou , S. Kevin Zhou

To correct for respiratory motion in PET imaging, an interpretable and unsupervised deep learning technique, FlowNet-PET, was constructed. The network was trained to predict the optical flow between two PET frames from different breathing…

Image and Video Processing · Electrical Eng. & Systems 2022-08-04 Teaghan O'Briain , Carlos Uribe , Kwang Moo Yi , Jonas Teuwen , Ioannis Sechopoulos , Magdalena Bazalova-Carter

We propose FlowReg, a deep learning-based framework for unsupervised image registration for neuroimaging applications. The system is composed of two architectures that are trained sequentially: FlowReg-A which affinely corrects for gross…

Computer Vision and Pattern Recognition · Computer Science 2021-09-02 Sergiu Mocanu , Alan R. Moody , April Khademi

Cardiac Cine Magnetic Resonance Imaging (MRI) provides an accurate assessment of heart morphology and function in clinical practice. However, MRI requires long acquisition times, with recent deep learning-based methods showing great promise…

Image and Video Processing · Electrical Eng. & Systems 2024-07-04 Siying Xu , Kerstin Hammernik , Andreas Lingg , Jens Kuebler , Patrick Krumm , Daniel Rueckert , Sergios Gatidis , Thomas Kuestner