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Tree data structures, such as red-black trees, quad trees, treaps, or tries, are fundamental tools in computer science. A classical problem in concurrency is to obtain expressive, efficient, and scalable versions of practical tree data…

Databases · Computer Science 2023-10-10 Ilya Kokorin , Dan Alistarh , Vitaly Aksenov

Comparative analyses of phylogenetic trees typically require identical taxon sets, however, in practice, trees often include distinct but overlapping taxa. Pruning non-shared leaves discards phylogenetic signal, whereas tree completion can…

Populations and Evolution · Quantitative Biology 2026-04-28 Aleksandr Koshkarov , Nadia Tahiri

Maxmin trees are labeled trees with the property that each vertex is either a local maximum or a local minimum. Such trees were originally introduced by Postnikov, who gave a formula to count them and different combinatorial interpretations…

Combinatorics · Mathematics 2019-02-06 William Dugan , Sam Glennon , Paul E. Gunnells , Einar Steingrimsson

We prove that a random labeled (unlabeled) tree is balanced. We also prove that random labeled and unlabeled trees are strongly $k$-balanced for any $k\geq 3$.

Combinatorics · Mathematics 2014-04-07 Azer Akhmedov , Warren Shreve

Tree balance has received considerable attention in recent years, both in phylogenetics and in other areas. Numerous (im)balance indices have been proposed to quantify the (im)balance of rooted trees. A recent comprehensive survey…

Populations and Evolution · Quantitative Biology 2026-01-27 Mareike Fischer , Tom Niklas Hamann , Kristina Wicke

Finding the nearest neighbor to a hyperplane (or Point-to-Hyperplane Nearest Neighbor Search, simply P2HNNS) is a new and challenging problem with applications in many research domains. While existing state-of-the-art hashing schemes (e.g.,…

Databases · Computer Science 2023-02-22 Qiang Huang , Anthony K. H. Tung

In recent years, dynamically growing data and incrementally growing number of classes pose new challenges to large-scale data classification research. Most traditional methods struggle to balance the precision and computational burden when…

Machine Learning · Computer Science 2016-11-01 Tingting Xie , Yuxing Peng , Changjian Wang

Binary search trees (BSTs) are fundamental data structures whose performance is largely governed by tree height. We introduce a block model for constructing BSTs by embedding internal BSTs into the nodes of an external BST -- a structure…

Probability · Mathematics 2026-03-17 John Peca-Medlin , Chenyang Zhong

The notion of directed treewidth was introduced by Johnson, Robertson, Seymour and Thomas [Journal of Combinatorial Theory, Series B, Vol 82, 2001] as a first step towards an algorithmic metatheory for digraphs. They showed that some…

Data Structures and Algorithms · Computer Science 2015-10-09 Mateus de Oliveira Oliveira

We present a $\lg n + 2 \lg \lg n+3$ ancestry labeling scheme for trees. The problem was first presented by Kannan et al. [STOC 88'] along with a simple $2 \lg n$ solution. Motivated by applications to XML files, the label size was improved…

Data Structures and Algorithms · Computer Science 2015-04-28 Søren Dahlgaard , Mathias Bæk Tejs Knudsen , Noy Rotbart

Phylogenetic networks generalise phylogenetic trees and allow for the accurate representation of the evolutionary history of a set of present-day species whose past includes reticulate events such as hybridisation and lateral gene transfer.…

Populations and Evolution · Quantitative Biology 2018-09-05 Joan Carles Pons , Charles Semple , Mike Steel

We introduce an adaptive tree search algorithm, that can find high-scoring outputs under translation models that make no assumptions about the form or structure of the search objective. This algorithm -- a deterministic variant of Monte…

Computation and Language · Computer Science 2022-02-24 Wang Ling , Wojciech Stokowiec , Domenic Donato , Laurent Sartran , Lei Yu , Austin Matthews , Chris Dyer

We consider an ordinal tree $T$ on $n$ nodes, with each node assigned a $d$-dimensional weight vector $\pnt{w} \in \{1,2,\ldots,n\}^d,$ where $d \in \mathbb{N}$ is a constant. We study path queries as generalizations of well-known…

Data Structures and Algorithms · Computer Science 2019-10-04 Meng He , Serikzhan Kazi

In this work, we study two types of constraints on two-dimensional binary arrays. In particular, given $p,\epsilon>0$, we study (i) The $p$-bounded constraint: a binary vector of size $m$ is said to be $p$-bounded if its weight is at most…

Information Theory · Computer Science 2022-08-22 Tuan Thanh Nguyen , Kui Cai , Han Mao Kiah , Kees A. Schouhamer Immink , Yeow Meng Chee

We present a bounded-error quantum algorithm for evaluating Min-Max trees. For a tree of size N our algorithm makes N^{1/2+o(1)} comparison queries, which is close to the optimal complexity for this problem.

Quantum Physics · Physics 2022-03-29 Richard Cleve , Dmytro Gavinsky , David L. Yonge-Mallo

The Yule process generates a class of binary trees which is fundamental to population genetic models and other applications in evolutionary biology. In this paper, we introduce a family of sub-classes of ranked trees, called Omega-trees,…

Populations and Evolution · Quantitative Biology 2013-08-14 Filippo Disanto , Anna Schlizio , Thomas Wiehe

Agreement forests continue to play a central role in the comparison of phylogenetic trees since their introduction more than 25 years ago. More specifically, they are used to characterise several distances that are based on tree…

Combinatorics · Mathematics 2025-09-23 Steven Kelk , Simone Linz , Charles Semple

Binary codes are widely used to represent the data due to their small storage and efficient computation. However, there exists an ambiguity problem that lots of binary codes share the same Hamming distance to a query. To alleviate the…

Computer Vision and Pattern Recognition · Computer Science 2020-06-12 Zhenyu Weng , Yuesheng Zhu

This research concerns Learned Data Structures, a recent area that has emerged at the crossroad of Machine Learning and Classic Data Structures. It is methodologically important and with a high practical impact. We focus on Learned Indexes,…

Data Structures and Algorithms · Computer Science 2023-09-06 Domenico Amato , Giosué Lo Bosco , Raffaele Giancarlo

The subject of pattern avoiding permutations has its roots in computer science, namely in the problem of sorting a permutation through a stack. A formula for the number of permutations of length n that can be sorted by passing it twice…

Combinatorics · Mathematics 2010-03-26 Anders Claesson , Sergey Kitaev , Einar Steingrimsson