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We present PYATB, a Python package designed for computing band structures and related properties of materials using the ab initio tight-binding Hamiltonian. The Hamiltonian is directly obtained after conducting self-consistent calculations…

Materials Science · Physics 2023-08-09 Gan Jin , ongsheng Pang , Yuyang Ji , Zujian Dai , Lixin He

We present a novel open-source Python framework called NanoNET (Nanoscale Non-equilibrium Electron Transport) for modelling electronic structure and transport. Our method is based on the tight-binding method and non-equilibrium Green's…

Computational Physics · Physics 2020-12-02 M. V. Klymenko , J. A. Vaitkus , J. S. Smith , J. H. Cole

Atomistic models like tight-binding (TB), bond-order potentials (BOP) and classical potentials describe the interatomic interaction in terms of mathematical functions with parameters that need to be adjusted for a particular material. The…

Computational Physics · Physics 2019-07-30 Alvin Noe Ladines , Thomas Hammerschmidt , Ralf Drautz

Ordinary Differential Equations (ODE) are used throughout science where the capture of rates of change in states is sought. While both pieces of commercial and open software exist to study such systems, their efficient and accurate usage…

Mathematical Software · Computer Science 2018-03-20 Edwin Tye , Tom Finnie , Ian Hall , Steve Leach

We present TopoTB, a software package written in the Mathematica language, designed to compute electronic structures, topological properties, and phase diagrams based on tight-binding models. TopoTB is user-friendly, with an interactive…

Materials Science · Physics 2024-03-14 Xinliang Huang , Fawei Zheng , Ning Hao

Multiple software packages currently exist for the computation of bulk topological invariants in both idealized tight-binding models and realistic Wannier tight-binding models derived from density functional theory. Currently, only one…

Materials Science · Physics 2024-06-14 Alexander C. Tyner

BondGraphTools is a Python library for scripted modelling of complex multi-physics systems. In contrast to existing modelling solutions, BondGraphTools is based upon the well established bond graph methodology, provides a programming…

Systems and Control · Electrical Eng. & Systems 2019-06-27 Peter Cudmore , Peter J. Gawthrop , Michael Pan , Edmund J. Crampin

HYPERTILING is a high-performance Python library for the generation and visualization of regular hyperbolic lattices embedded in the Poincar\'e disk model. Using highly optimized, efficient algorithms, hyperbolic tilings with millions of…

Computational Physics · Physics 2024-06-27 Manuel Schrauth , Yanick Thurn , Florian Goth , Jefferson S. E. Portela , Dietmar Herdt , Felix Dusel

bde is a user-friendly Python package for Bayesian Deep Ensembles with a particular focus on tabular data. Built on an efficient JAX implementation of the sampling-based inference method Microcanonical Langevin Ensembles (MILE), it provides…

Machine Learning · Computer Science 2026-05-15 Vyron Arvanitis , Angelos Aslanidis , Emanuel Sommer , David Rügamer

We present PyRigi, a novel Python package designed to study the rigidity properties of graphs and frameworks. Among many other capabilities, PyRigi can determine whether a graph admits only finitely many ways, up to isometries, of being…

Metric Geometry · Mathematics 2025-06-06 Matteo Gallet , Georg Grasegger , Matthias Himmelmann , Jan Legerský

Hyperparameter optimization and neural architecture search can become prohibitively expensive for regular black-box Bayesian optimization because the training and evaluation of a single model can easily take several hours. To overcome this,…

We describe the R package MOODE and demonstrate its use to find multi-objective optimal experimental designs. Multi-Objective Optimal Design of Experiments (MOODE) targets the experimental objectives directly, ensuring that the full set of…

Computation · Statistics 2024-12-24 Vasiliki Koutra , Olga Egorova , Steven G. Gilmour , Luzia A. Trinca

We present a Mathematica program package MagneticTB, which can generate the tight-binding model for arbitrary magnetic space group. The only input parameters in MagneticTB are the (magnetic) space group number and the orbital information in…

Materials Science · Physics 2022-01-25 Zeying Zhang , Zhi-Ming Yu , Gui-Bin Liu , Yugui Yao

The absorption and emission of light by exoplanet atmospheres encode details of atmospheric composition, temperature, and dynamics. Fundamentally, simulating these processes requires detailed knowledge of the opacity of gases within an…

Instrumentation and Methods for Astrophysics · Physics 2024-08-07 Arjun B. Savel , Megan Bedell , Eliza M. -R. Kempton

Pairing-based cryptography (PBC) is crucial in modern cryptographic applications. With the rapid advancement of adversarial research and the growing diversity of application requirements, PBC accelerators need regular updates in algorithms,…

Hardware Architecture · Computer Science 2025-09-15 Tianwei Pan , Tianao Dai , Jianlei Yang , Hongbin Jing , Yang Su , Zeyu Hao , Xiaotao Jia , Chunming Hu , Weisheng Zhao

Quantum simulation with ultracold atoms provides a versatile platform to emulate condensed-matter models. In particular, momentum-space lattices enable the realization of programmable tight-binding Hamiltonians. Here, we generalize this…

Quantum Gases · Physics 2026-04-28 D. Ronco , F. Arrouas , N. Ombredane , E. Flament , Q. Levoy , B. Peaudecerf , D. Guéry-Odelin

Topological materials exhibit protected edge modes that have been proposed for applications in for example spintronics and quantum computation. While a number of such systems exist, it would be desirable to be able to test theoretical…

Mesoscale and Nanoscale Physics · Physics 2018-10-15 Robert Drost , Teemu Ojanen , Ari Harju , Peter Liljeroth

rigidPy is a Python package that provides a set of tools necessary for studying rigidity and mechanical response in spring networks. It also includes suitable modules for generating new realizations of networks with applications in glassy…

Soft Condensed Matter · Physics 2022-03-02 Varda F. Hagh , Mahdi Sadjadi

The dynamic mode decomposition (DMD) is a simple and powerful data-driven modeling technique that is capable of revealing coherent spatiotemporal patterns from data. The method's linear algebra-based formulation additionally allows for a…

We introduce a refined tight-binding (TB) model for Pt-based jacutingaite materials Pt$_{2}N$X$_{3}$, ($N$ = Zn, Cd, Hg; X = S, Se, Te), offering a detailed representation of the low-energy physics of its monolayers. This model incorporates…

Materials Science · Physics 2024-10-11 G. Santos-Castro , L. K. Teles , I. Guilhon Mitoso , J. M. Pereira
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