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Related papers: DiffGLE: Differentiable Coarse-Grained Dynamics us…

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Molecular dynamics simulations provide theoretical insight into the microscopic behavior of materials in condensed phase and, as a predictive tool, enable computational design of new compounds. However, because of the large temporal and…

Chemical Physics · Physics 2020-06-18 Wujie Wang , Rafael Gómez-Bombarelli

We consider a system of interacting particles governed by the generalized Langevin equation (GLE) in the presence of external confining potentials, singular repulsive forces, as well as memory kernels. Using a Mori-Zwanzig approach, we…

Probability · Mathematics 2024-03-15 Manh Hong Duong , Hung D. Nguyen

Coarse-grained (CG) models are often parametrized to reproduce one-dimensional structural correlation functions of an atomically-detailed model along the degrees of freedom governing each interaction potential. While cross correlations…

Soft Condensed Matter · Physics 2019-12-02 Svenja J. Woerner , Tristan Bereau , Kurt Kremer , Joseph F. Rudzinski

The purpose of this paper is to examine the Lagrangian stochastic modeling of the fluid velocity seen by inertial particles in a nonhomogeneous turbulent flow. A new Langevin-type model, compatible with the transport equation of the drift…

Fluid Dynamics · Physics 2009-07-01 Boris Arcen , Anne Tanière

The irreversible generalized Langevin equation (iGLE) contains a nonstationary friction kernel that in certain limits reduces to the GLE with space-dependent friction. For more general forms of the friction kernel, the iGLE was previously…

Statistical Mechanics · Physics 2007-05-23 Marc Vogt , Rigoberto Hernandez

We study analytically and by event-driven molecular dynamics simulations the nonergodic and aging properties of force-free cooling granular gases with both constant and velocity-dependent (viscoelastic) restitution coefficient $\varepsilon$…

Statistical Mechanics · Physics 2015-10-28 Anna Bodrova , Aleksei V. Chechkin , Andrey G. Cherstvy , Ralf Metzler

Discrete particle simulations are widely used to study large-scale particulate flows in complex geometries where particle-particle and particle-fluid interactions require an adequate representation but the computational cost has to be kept…

Computational Engineering, Finance, and Science · Computer Science 2017-11-02 Christoph Rettinger , Ulrich Rüde

Numerical simulations provide key insights into many physical, real-world problems. However, while these simulations are solved on a full 3D domain, most analysis only require a reduced set of metrics (e.g. plane-level concentrations). This…

Computational Physics · Physics 2025-11-27 Tingkai Xue , Chin Chun Ooi , Zhengwei Ge , Fong Yew Leong , Hongying Li , Chang Wei Kang

Bottom-up coarse-grained (CG) modeling expands the spatial and temporal scales of molecular simulation by seeking a reduced, thermodynamically consistent representation of an atomistic model. Developments in CG theory have largely focused…

Chemical Physics · Physics 2025-03-28 Patrick G. Sahrmann , Gregory A. Voth

The classic Lorenz equations were originally derived from the two-dimensional Rayleigh-B\'enard convection system considering an idealised case with the lowest order of harmonics. Although the low-order Lorenz equations have traditionally…

Dynamical Systems · Mathematics 2021-09-10 Junho Park , Sungju Moon , Jaemyeong Mango Seo , Jong-Jin Baik

The accurate numerical simulation of turbulent incompressible flows is a challenging topic in computational fluid dynamics. For discretisation methods to be robust in the under-resolved regime, mass conservation as well as energy stability…

Computational Physics · Physics 2025-10-20 Niklas Fehn , Martin Kronbichler , Christoph Lehrenfeld , Gert Lube , Philipp W. Schroeder

We study large-scale dynamics in the Ginzburg-Landau equation (GLE) using a reduced description derived from a WKB expansion. Rigorous mathematical results establishing that this reduced equation accurately approximates the full GLE are…

Pattern Formation and Solitons · Physics 2026-04-15 Yijun Lin , Adrian van Kan , Edgar Knobloch

Modeling continuous-time dynamics constitutes a foundational challenge, and uncovering inter-component correlations within complex systems holds promise for enhancing the efficacy of dynamic modeling. The prevailing approach of integrating…

Machine Learning · Computer Science 2023-12-19 Lanlan Chen , Kai Wu , Jian Lou , Jing Liu

We introduce a generalized machine learning framework to probabilistically parameterize upper-scale models in the form of nonlinear PDEs consistent with a continuum theory, based on coarse-grained atomistic simulation data of mechanical…

Gaseous flows show a diverse set of behaviors on different characteristic scales. Given the coarse-grained modeling in theories of fluids, considerable uncertainties may exist between the flow-field solutions and the real physics. To study…

Computational Physics · Physics 2021-05-05 Tianbai Xiao , Martin Frank

The non--static generalized Langevin equation and its corresponding Fokker--Planck equation for the position of a viscous fluid particle were solved in closed form for a time dependent external force. Its solution for a constant external…

Statistical Mechanics · Physics 2018-05-08 Wilmer Olivares-Rivas , Pedro J. Colmenares

Stochastic Gradient Langevin Dynamics infuses isotropic gradient noise to SGD to help navigate pathological curvature in the loss landscape for deep networks. Isotropic nature of the noise leads to poor scaling, and adaptive methods based…

Machine Learning · Computer Science 2019-06-13 Chandrasekaran Anirudh Bhardwaj

A procedure suggested by Vvedensky for obtaining continuum equations as the coarse-grained limit of discrete models is applied to the restricted solid-on-solid model with both adsorption and desorption. Using an expansion of the master…

Statistical Mechanics · Physics 2007-05-23 Achilleas Lazarides

The development of reduced models for complex multiscale problems remains one of the principal challenges in computational physics. The optimal prediction framework of Chorin et al., which is a reformulation of the Mori-Zwanzig (M-Z)…

Fluid Dynamics · Physics 2017-09-13 Eric J. Parish , Karthik Duraisamy

A major stumbling block for statistical physics and materials science has been the lack of a uni- versal principle that allows us to understand and predict elementary structural, morphological, and dynamical properties of non-equilibrium…