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Much of biomedical and healthcare data is encoded in discrete, symbolic form such as text and medical codes. There is a wealth of expert-curated biomedical domain knowledge stored in knowledge bases and ontologies, but the lack of reliable…

Artificial Intelligence · Computer Science 2020-06-25 David Chang , Ivana Balazevic , Carl Allen , Daniel Chawla , Cynthia Brandt , Richard Andrew Taylor

Knowledge graph embedding techniques are widely used for knowledge graph refinement tasks such as graph completion and triple classification. These techniques aim at embedding the entities and relations of a Knowledge Graph (KG) in a low…

Computation and Language · Computer Science 2022-11-22 Armita Khajeh Nassiri , Nathalie Pernelle , Fatiha Sais , Gianluca Quercini

Graph representation learning embeds nodes in large graphs as low-dimensional vectors and is of great benefit to many downstream applications. Most embedding frameworks, however, are inherently transductive and unable to generalize to…

Machine Learning · Computer Science 2020-02-27 Huiling Zhu , Xin Luo , Hankz Hankui Zhuo

Complex Query Answering (CQA) is a challenge task of Knowledge Graph (KG). Due to the incompleteness of KGs, query embedding (QE) methods have been proposed to encode queries and entities into the same embedding space, and treat logical…

Artificial Intelligence · Computer Science 2025-09-30 Yao Xu , Shizhu He , Cunguang Wang , Li Cai , Kang Liu , Jun Zhao

Many popular knowledge graphs such as Freebase, YAGO or DBPedia maintain a list of non-discrete attributes for each entity. Intuitively, these attributes such as height, price or population count are able to richly characterize entities in…

Artificial Intelligence · Computer Science 2017-08-17 Yi Tay , Luu Anh Tuan , Minh C. Phan , Siu Cheung Hui

Pre-trained language models such as BERT have been a key ingredient to achieve state-of-the-art results on a variety of tasks in natural language processing and, more recently, also in information retrieval.Recent research even claims that…

Information Retrieval · Computer Science 2022-05-03 Emma J. Gerritse , Faegheh Hasibi , Arjen P. de Vries

Knowledge Graphs, such as Wikidata, comprise structural and textual knowledge in order to represent knowledge. For each of the two modalities dedicated approaches for graph embedding and language models learn patterns that allow for…

Computation and Language · Computer Science 2023-08-21 Mojtaba Nayyeri , Zihao Wang , Mst. Mahfuja Akter , Mirza Mohtashim Alam , Md Rashad Al Hasan Rony , Jens Lehmann , Steffen Staab

Entity alignment is the task of linking entities with the same real-world identity from different knowledge graphs (KGs), which has been recently dominated by embedding-based methods. Such approaches work by learning KG representations so…

Computation and Language · Computer Science 2019-08-23 Yuting Wu , Xiao Liu , Yansong Feng , Zheng Wang , Rui Yan , Dongyan Zhao

Embedding learning, a.k.a. representation learning, has been shown to be able to model large-scale semantic knowledge graphs. A key concept is a mapping of the knowledge graph to a tensor representation whose entries are predicted by models…

Artificial Intelligence · Computer Science 2016-05-10 Volker Tresp , Cristóbal Esteban , Yinchong Yang , Stephan Baier , Denis Krompaß

Integrating structured knowledge from Knowledge Graphs (KGs) into Large Language Models (LLMs) remains a key challenge for symbolic reasoning. Existing methods mainly rely on prompt engineering or fine-tuning, which lose structural fidelity…

Machine Learning · Computer Science 2025-05-13 Erica Coppolillo

Knowledge graph entity typing aims to infer entities' missing types in knowledge graphs which is an important but under-explored issue. This paper proposes a novel method for this task by utilizing entities' contextual information.…

Computation and Language · Computer Science 2021-09-17 Weiran Pan , Wei Wei , Xian-Ling Mao

Translational distance-based knowledge graph embedding has shown progressive improvements on the link prediction task, from TransE to the latest state-of-the-art RotatE. However, N-1, 1-N and N-N predictions still remain challenging. In…

Computation and Language · Computer Science 2020-04-17 Yun Tang , Jing Huang , Guangtao Wang , Xiaodong He , Bowen Zhou

Knowledge graphs have emerged as fundamental structures for representing complex relational data across scientific and enterprise domains. However, existing embedding methods face critical limitations when modeling diverse relationship…

Artificial Intelligence · Computer Science 2025-11-17 Jugal Gajjar , Kaustik Ranaware , Kamalasankari Subramaniakuppusamy , Vaibhav Gandhi

Entity Alignment (EA) aims to find the equivalent entities between two Knowledge Graphs (KGs). Existing methods usually encode the triples of entities as embeddings and learn to align the embeddings, which prevents the direct interaction…

Computation and Language · Computer Science 2023-05-22 Yu Zhao , Yike Wu , Xiangrui Cai , Ying Zhang , Haiwei Zhang , Xiaojie Yuan

Graph autoencoders (GAEs) are powerful tools in representation learning for graph embedding. However, the performance of GAEs is very dependent on the quality of the graph structure, i.e., of the adjacency matrix. In other words, GAEs would…

Machine Learning · Computer Science 2021-03-24 Rui Zhang , Yunxing Zhang , Xuelong Li

Knowledge graph embedding models have gained significant attention in AI research. Recent works have shown that the inclusion of background knowledge, such as logical rules, can improve the performance of embeddings in downstream machine…

Artificial Intelligence · Computer Science 2019-08-21 Mojtaba Nayyeri , Chengjin Xu , Jens Lehmann , Hamed Shariat Yazdi

Extracting structured knowledge from texts has traditionally been used for knowledge base generation. However, other sources of information, such as images can be leveraged into this process to build more complete and richer knowledge…

Computer Vision and Pattern Recognition · Computer Science 2020-09-15 Ashutosh Tiwari , Sandeep Varma

Knowledge graphs (KGs) comprise entities interconnected by relations of different semantic meanings. KGs are being used in a wide range of applications. However, they inherently suffer from incompleteness, i.e. entities or facts about…

Artificial Intelligence · Computer Science 2023-12-11 Nicolas Hubert , Pierre Monnin , Heiko Paulheim

Named entity linking is to map an ambiguous mention in documents to an entity in a knowledge base. The named entity linking is challenging, given the fact that there are multiple candidate entities for a mention in a document. It is…

Computation and Language · Computer Science 2020-02-13 Wei Shi , Siyuan Zhang , Zhiwei Zhang , Hong Cheng , Jeffrey Xu Yu

Inductive link prediction with knowledge hypergraphs is the task of predicting missing hyperedges involving completely novel entities (i.e., nodes unseen during training). Existing methods for inductive link prediction with knowledge…

Machine Learning · Computer Science 2026-05-11 Xingyue Huang , Mikhail Galkin , Michael M. Bronstein , İsmail İlkan Ceylan