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A Boolean network (BN) is called observable if any initial state can be uniquely determined from the output sequence. In the existing literature on observability of BNs, there is almost no research on the relationship between the number of…

Systems and Control · Electrical Eng. & Systems 2024-07-29 Liangjie Sun , Wai-Ki Ching , Tatsuya Akutsu

The dynamics of Boolean networks (the N-K model) with scale-free topology are studied here. The existence of a phase transition governed by the value of the scale-free exponent of the network is shown analytically by analyzing the overlap…

Disordered Systems and Neural Networks · Physics 2007-05-23 Maximino Aldana

The relationship between the properties of a dynamical system and the structure of its defining equations has long been studied in many contexts. Here we study this problem for the class of conjunctive (resp. disjunctive) Boolean networks,…

Combinatorics · Mathematics 2008-05-13 Abdul Salam Jarrah , Reinhard Laubenbacher , Alan Veliz-Cuba

A $k$-independent set in a connected graph is a set of vertices such that any two vertices in the set are at distance greater than $k$ in the graph. The $k$-independence number of a graph, denoted $\alpha_k$, is the size of a largest…

Combinatorics · Mathematics 2023-05-01 Lord C. Kavi , Mike Newman

The $k$-independence number of a graph is the maximum size of a set of vertices at pairwise distance greater than $k$. A graph is called $k$-partially walk-regular if the number of closed walks of a given length $l\le k$, rooted at a vertex…

Combinatorics · Mathematics 2019-11-26 M. A. Fiol

Boolean networks are special types of finite state time-discrete dynamical systems. A Boolean network can be described by a function from an n-dimensional vector space over the field of two elements to itself. A fundamental problem in…

Quantitative Methods · Quantitative Biology 2013-07-03 Yi Ming Zou

A Boolean network (BN) with $n$ components is a discrete dynamical system described by the successive iterations of a function $f:\{0,1\}^n \to \{0,1\}^n$. This model finds applications in biology, where fixed points play a central role.…

Combinatorics · Mathematics 2022-02-10 Florian Bridoux , Amélia Durbec , Kévin Perrot , Adrien Richard

A Boolean network is a finite dynamical system, whose variables take values from a binary set. The value update rule for each variable is a Boolean function, depending on a selected subset of variables. Boolean networks have been widely…

Dynamical Systems · Mathematics 2017-08-10 Zuguang Gao , Xudong Chen , Tamer Başar

A Boolean network (BN) with $n$ components is a discrete dynamical system described by the successive iterations of a function $f:\{0,1\}^n\to\{0,1\}^n$. In most applications, the main parameter is the interaction graph of $f$: the digraph…

Combinatorics · Mathematics 2021-05-06 Aymeric Picard Marchetto , Adrien Richard

Given a graph $G$, viewed as a loop-less symmetric digraph, we study the maximum number of fixed points in a conjunctive boolean network with $G$ as interaction graph. We prove that if $G$ has no induced $C_4$, then this quantity equals…

Combinatorics · Mathematics 2017-11-08 Julio Aracena , Adrien Richard , Lilian Salinas

Boolean networks, first developed in the late 1960s as a tool for studying complex disordered dynamical systems, consist of nodes governed by Boolean functions whose evolution is entirely deterministic in that the state of the network at a…

Quantum Physics · Physics 2023-03-02 Ian T. Durham

A Boolean network is a mapping $f :\{0,1\}^n \to \{0,1\}^n$, which can be used to model networks of $n$ interacting entities, each having a local Boolean state that evolves over time according to a deterministic function of the current…

Combinatorics · Mathematics 2021-04-29 Maximilien Gadouleau

This paper is concerned with cross-sectional dependence arising because observations are interconnected through an observed network. Following Doukhan and Louhichi (1999), we measure the strength of dependence by covariances of nonlinearly…

Econometrics · Economics 2025-03-10 Denis Kojevnikov , Vadim Marmer , Kyungchul Song

Automata networks, and in particular Boolean networks, are used to model diverse networks of interacting entities. The interaction graph of an automata network is its most important parameter, as it represents the overall architecture of…

Formal Languages and Automata Theory · Computer Science 2023-09-21 Maximilien Gadouleau

Different Boolean networks may reveal similar dynamics although their definition differs, then preventing their distinction from the observations. This raises the question about the sufficiency of a particular Boolean network for properly…

Discrete Mathematics · Computer Science 2014-11-25 Franck Delaplace

Stability is an important characteristic of network models that has implications for other desirable aspects such as controllability. The stability of a Boolean network depends on various factors, such as the topology of its wiring diagram…

Chaotic Dynamics · Physics 2024-07-09 Karthik Chandrasekhar , Claus Kadelka , Reinhard Laubenbacher , David Murrugarra

The $k$-independence number of a graph $G$ is the maximum size of a set of vertices at pairwise distance greater than $k$. In this paper, for each positive integer $k$, we prove sharp upper bounds for the $k$-independence number in an…

Combinatorics · Mathematics 2020-09-01 Zhenyu Taoqiu , Suil O , Yongtang Shi

In this paper, we obtain two spectral upper bounds for the $k$-independence number of a graph which is is the maximum size of a set of vertices at pairwise distance greater than $k$. We construct graphs that attain equality for our first…

Combinatorics · Mathematics 2016-08-19 Aida Abiad , Sebastian Cioabă , Michael Tait

In this paper, we deal the following decision problem: given a conjunctive Boolean network defined by its interaction digraph, does it have a limit cycle of a given length k? We prove that this problem is NP-complete in general if k is a…

Discrete Mathematics · Computer Science 2022-03-23 Julio Aracena , Florian Bridoux , Luis Gómez , Lilian Salinas

This paper generalizes and unifies the existing spectral bounds on the $k$-independence number of a graph, which is the maximum size of a set of vertices at pairwise distance greater than $k$. The previous bounds known in the literature…

Combinatorics · Mathematics 2018-08-28 A. Abiad , G. Coutinho , M. A. Fiol
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