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Structural and functional information encoded in DNA combined with unique properties of nanomaterials could be of use for the construction of novel biocomputational circuits and intelligent biomedical nanodevices. However, at present their…

Materials Science · Physics 2013-07-16 Jun Zhang , Cuong Cao , Xinlong Xu , Chihao Liow , Shuzhou Li , Ping-Heng Tan , Qihua Xiong

DNA methylation is a crucial regulator of gene transcription and has been linked to various diseases, including autoimmune diseases and cancers. However, diagnostics based on DNA methylation face challenges due to large feature sets and…

Machine Learning · Computer Science 2023-08-04 Pengcheng Xu , Jinpu Cai , Yulin Gao , Ziqi Rong

Several of the next generation sequencers are limited in their sample preparation process by the need to make an absolute measurement of the number of template molecules in the library to be sequenced. As currently practiced, the practical…

Quantitative Methods · Quantitative Biology 2008-08-19 Richard A. White , Paul Blainey , H. Christina Fan , Stephen R. Quake

A new multivariate density estimator for stationary sequences is obtained by Fourier inversion of the thresholded empirical characteristic function. This estimator does not depend on the choice of parameters related to the smoothness of the…

Statistics Theory · Mathematics 2023-05-24 Sinda Ammous , Jérôme Dedecker , Céline Duval

DNA methylation is a well-studied genetic modification that regulates gene transcription of Eukaryotes. Its alternations have been recognized as a significant component of cancer development. In this study, we use the DNA methylation 450k…

Tissues and Organs · Quantitative Biology 2021-01-05 Shen Jia , Yulin Zhang , Yiming Mao , Jiawei Gao , Yixuan Chen , Yuxuan Jiang , Haochen Luo , Kebo Lv , Jionglong Su

The design of hybrid peptide-solid interfaces for nanotechnological applications such as biomolecular nanoarrays requires a deep understanding of the basic mechanisms of peptide binding and assembly at solid substrates. Here we show by…

Mesoscale and Nanoscale Physics · Physics 2011-07-07 Michael Bachmann , Karsten Goede , Annette G. Beck-Sickinger , Marius Grundmann , Anders Irbäck , Wolfhard Janke

Adapter-Tuning (AT) method involves freezing a pre-trained model and introducing trainable adapter modules to acquire downstream knowledge, thereby calibrating the model for better adaptation to downstream tasks. This paper proposes a…

Computer Vision and Pattern Recognition · Computer Science 2024-03-26 Jiacheng Ruan , Jingsheng Gao , Mingye Xie , Daize Dong , Suncheng Xiang , Ting Liu , Yuzhuo Fu

Knowledge Distillation (KD) has been used in image classification for model compression. However, rare studies apply this technology on single-stage object detectors. Focal loss shows that the accumulated errors of easily-classified samples…

Computer Vision and Pattern Recognition · Computer Science 2019-01-15 Shitao Tang , Litong Feng , Wenqi Shao , Zhanghui Kuang , Wei Zhang , Yimin Chen

Advances in molecular biology are enabling rapid and efficient analyses for effective intervention in domains such as biology research, infectious disease management, food safety, and biodefense. The emergence of microfluidics and…

Quantitative Methods · Quantitative Biology 2017-03-28 Harikrishnan Jayamohan , Valentin Romanov , Huizhong Li , Jiyoung Son , Raheel Samuel , John Nelson , Bruce Gale

The underlying mechanism for Adaptive Feedback Control in the experimental photoisomerization of NK88 in methanol is exposed theoretically. With given laboratory limitations on laser output, the complicated electric fields are shown to…

Quantum Physics · Physics 2009-11-11 Kunihito Hoki , Paul Brumer

For simulation studies of (macro) molecular liquids it would be of significant interest to be able to adjust or increase the level of resolution within one region of space, while allowing for the free exchange of molecules between open…

Spectroscopy is an important tool for probing the properties of materials, chemicals and biological samples. We design a practical transmitter-receiver system that exploits entanglement to achieve a provable quantum advantage over all…

Quantum Physics · Physics 2020-11-03 Haowei Shi , Zheshen Zhang , Stefano Pirandola , Quntao Zhuang

Determining positive/negative samples for object detection is known as label assignment. Here we present an anchor-free detector named AutoAssign. It requires little human knowledge and achieves appearance-aware through a fully…

Computer Vision and Pattern Recognition · Computer Science 2020-11-26 Benjin Zhu , Jianfeng Wang , Zhengkai Jiang , Fuhang Zong , Songtao Liu , Zeming Li , Jian Sun

Sampling is a fundamental problem in computer science and statistics. However, for a given task and stream, it is often not possible to choose good sampling probabilities in advance. We derive a general framework for adaptively changing the…

Machine Learning · Statistics 2022-06-16 Daniel Ting

Accurate prediction of antibody-antigen (Ab-Ag) interfaces is critical for vaccine design, immunodiagnostics, and therapeutic antibody development. However, achieving reliable predictions from sequences alone remains a challenge. In this…

Machine Learning · Computer Science 2025-09-30 Zhang-Yu You , Jiahao Ma , Hongzong Li , Ye-Fan Hu , Jian-Dong Huang

Cross-domain few-shot learning presents a formidable challenge, as models must be trained on base classes and then tested on novel classes from various domains with only a few samples at hand. While prior approaches have primarily focused…

Computer Vision and Pattern Recognition · Computer Science 2023-12-19 Yongjin Yang , Taehyeon Kim , Se-Young Yun

Segmentation is a crucial analysis task in biomedical imaging. Given the diverse experimental settings in this field, the lack of generalization limits the use of deep learning in practice. Domain adaptation is a promising remedy: it…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Anwai Archit , Constantin Pape

Gene expression profiles obtained through DNA microarray have proven successful in providing critical information for cancer detection classifiers. However, the limited number of samples in these datasets poses a challenge to employ complex…

Machine Learning · Computer Science 2024-08-20 Arya Hadizadeh Moghaddam , Mohsen Nayebi Kerdabadi , Cuncong Zhong , Zijun Yao

Single-chip CMOS-based biosensors that feature microcantilevers as transducer elements are presented. The cantilevers are functionalized for the capturing of specific analytes, e.g., proteins or DNA. The binding of the analyte changes the…

Hardware Architecture · Computer Science 2011-11-09 K. -U. Kirstein , Y. Li , M. Zimmermann , C. Vancura , T. Volden , W. H. Song , J. Lichtenberg , A. Hierlemannn

Ultrasound is a key technology in healthcare, and it is being explored for non-invasive, wearable, continuous monitoring of vital signs. However, its widespread adoption in this scenario is still hindered by the size, complexity, and power…