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The surge of research in image segmentation has yielded remarkable performance gains but also exposed a reproducibility crisis. A major contributor is performance evaluation, where both selection and implementation of metrics play critical…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Gašper Podobnik , Tomaž Vrtovec

Dice similarity coefficient (DSC) and Hausdorff distance (HD) are widely used for evaluating medical image segmentation. They have also been criticised, when reported alone, for their unclear or even misleading clinical interpretation. DSCs…

Image and Video Processing · Electrical Eng. & Systems 2022-04-01 Wen Yan , Qianye Yang , Tom Syer , Zhe Min , Shonit Punwani , Mark Emberton , Dean C. Barratt , Bernard Chiu , Yipeng Hu

The Hausdorff distance is a measure of (dis-)similarity between two sets which is widely used in various applications. Most of the applied literature is devoted to the computation for sets consisting of a finite number of points. This has…

Metric Geometry · Mathematics 2020-09-22 Daniel Kraft

The assessment of segmentation quality plays a fundamental role in the development, optimization, and comparison of segmentation methods which are used in a wide range of applications. With few exceptions, quality assessment is performed…

Computer Vision and Pattern Recognition · Computer Science 2025-04-02 Niklas Rottmayer , Claudia Redenbach

In the last decade, research on artificial intelligence has seen rapid growth with deep learning models, especially in the field of medical image segmentation. Various studies demonstrated that these models have powerful prediction…

Image and Video Processing · Electrical Eng. & Systems 2022-02-14 Dominik Müller , Iñaki Soto-Rey , Frank Kramer

Computer vision technology is widely used in biological and medical data analysis and understanding. However, there are still two major bottlenecks in the field of cell membrane segmentation, which seriously hinder further research: lack of…

Computer Vision and Pattern Recognition · Computer Science 2020-10-19 Ruohua Shi , Wenyao Wang , Zhixuan Li , Liuyuan He , Kaiwen Sheng , Lei Ma , Kai Du , Tingting Jiang , Tiejun Huang

Validation metrics are key for the reliable tracking of scientific progress and for bridging the current chasm between artificial intelligence (AI) research and its translation into practice. However, increasing evidence shows that…

The Hausdorff distance is a fundamental measure for comparing sets of vectors, widely used in database theory and geometric algorithms. However, its exact computation is computationally expensive, often making it impractical for large-scale…

Databases · Computer Science 2025-03-11 Dongfang Zhao

Within medical imaging segmentation, the Dice coefficient and Hausdorff-based metrics are standard measures of success for deep learning models. However, modern loss functions for medical image segmentation often only consider the Dice…

Image and Video Processing · Electrical Eng. & Systems 2024-01-26 Adrian Celaya , Beatrice Riviere , David Fuentes

Background: In the field of radiology and radiotherapy, accurate delineation of tissues and organs plays a crucial role in both diagnostics and therapeutics. While the gold standard remains expert-driven manual segmentation, many automatic…

Quantitative Methods · Quantitative Biology 2025-08-14 Szuzina Fazekas , Bettina Katalin Budai , Viktor Bérczi , Pál Maurovich-Horvat , Zsolt Vizi

Computer assisted technologies based on algorithmic software segmentation are an increasing topic of interest in complex surgical cases. However - due to functional instability, time consuming software processes, personnel resources or…

While the importance of automatic image analysis is continuously increasing, recent meta-research revealed major flaws with respect to algorithm validation. Performance metrics are particularly key for meaningful, objective, and transparent…

Image and Video Processing · Electrical Eng. & Systems 2023-12-08 Annika Reinke , Minu D. Tizabi , Carole H. Sudre , Matthias Eisenmann , Tim Rädsch , Michael Baumgartner , Laura Acion , Michela Antonelli , Tal Arbel , Spyridon Bakas , Peter Bankhead , Arriel Benis , Matthew Blaschko , Florian Buettner , M. Jorge Cardoso , Jianxu Chen , Veronika Cheplygina , Evangelia Christodoulou , Beth Cimini , Gary S. Collins , Sandy Engelhardt , Keyvan Farahani , Luciana Ferrer , Adrian Galdran , Bram van Ginneken , Ben Glocker , Patrick Godau , Robert Haase , Fred Hamprecht , Daniel A. Hashimoto , Doreen Heckmann-Nötzel , Peter Hirsch , Michael M. Hoffman , Merel Huisman , Fabian Isensee , Pierre Jannin , Charles E. Kahn , Dagmar Kainmueller , Bernhard Kainz , Alexandros Karargyris , Alan Karthikesalingam , A. Emre Kavur , Hannes Kenngott , Jens Kleesiek , Andreas Kleppe , Sven Kohler , Florian Kofler , Annette Kopp-Schneider , Thijs Kooi , Michal Kozubek , Anna Kreshuk , Tahsin Kurc , Bennett A. Landman , Geert Litjens , Amin Madani , Klaus Maier-Hein , Anne L. Martel , Peter Mattson , Erik Meijering , Bjoern Menze , David Moher , Karel G. M. Moons , Henning Müller , Brennan Nichyporuk , Felix Nickel , M. Alican Noyan , Jens Petersen , Gorkem Polat , Susanne M. Rafelski , Nasir Rajpoot , Mauricio Reyes , Nicola Rieke , Michael Riegler , Hassan Rivaz , Julio Saez-Rodriguez , Clara I. Sánchez , Julien Schroeter , Anindo Saha , M. Alper Selver , Lalith Sharan , Shravya Shetty , Maarten van Smeden , Bram Stieltjes , Ronald M. Summers , Abdel A. Taha , Aleksei Tiulpin , Sotirios A. Tsaftaris , Ben Van Calster , Gaël Varoquaux , Manuel Wiesenfarth , Ziv R. Yaniv , Paul Jäger , Lena Maier-Hein

Accurate identification and localization of anatomical structures of varying size and appearance in laparoscopic imaging are necessary to leverage the potential of computer vision techniques for surgical decision support. Segmentation…

Computer Vision and Pattern Recognition · Computer Science 2024-04-16 Fiona R. Kolbinger , Jiangpeng He , Jinge Ma , Fengqing Zhu

The segmentation of multiple organs in multi-parametric MRI studies is critical for many applications in radiology, such as correlating imaging biomarkers with disease status (e.g., cirrhosis, diabetes). Recently, three publicly available…

Computer Vision and Pattern Recognition · Computer Science 2025-04-11 Nicole Tran , Anisa Prasad , Yan Zhuang , Tejas Sudharshan Mathai , Boah Kim , Sydney Lewis , Pritam Mukherjee , Jianfei Liu , Ronald M. Summers

While emerging 3D medical foundation models are envisioned as versatile tools with offer general-purpose capabilities, their validation remains largely confined to regional and structural imaging, leaving a significant modality discrepancy…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Yichi Zhang , Feiyang Xiao , Le Xue , Wenbo Zhang , Gang Feng , Chenguang Zheng , Yuan Qi , Yuan Cheng , Zixin Hu

Medical images annotation is most of the time a repetitive hard task. Collecting old similar annotations and assigning them to new medical images may not only enhance the annotation process, but also reduce ambiguity caused by repetitive…

Information Retrieval · Computer Science 2012-03-09 Riadh Bouslimi , Jalel Akaichi

The Hausdorff distance (HD) is a robust measure of set dissimilarity, but computing it exactly on large, high-dimensional datasets is prohibitively expensive. We propose \textbf{ProHD}, a projection-guided approximation algorithm that…

Information Retrieval · Computer Science 2025-11-25 Jiuzhou Fu , Luanzheng Guo , Nathan R. Tallent , Dongfang Zhao

Average Hausdorff Distance (AVD) is a widely used performance measure to calculate the distance between two point sets. In medical image segmentation, AVD is used to compare ground truth images with segmentation results allowing their…

Image and Video Processing · Electrical Eng. & Systems 2020-09-15 Orhun Utku Aydin , Abdel Aziz Taha , Adam Hilbert , Ahmed A. Khalil , Ivana Galinovic , Jochen B. Fiebach , Dietmar Frey , Vince Istvan Madai

Periorbital segmentation and distance prediction using deep learning allows for the objective quantification of disease state, treatment monitoring, and remote medicine. However, there are currently no reports of segmentation datasets for…

Distance metric learning is a branch of machine learning that aims to learn distances from the data, which enhances the performance of similarity-based algorithms. This tutorial provides a theoretical background and foundations on this…

Machine Learning · Computer Science 2020-08-20 Juan Luis Suárez-Díaz , Salvador García , Francisco Herrera
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