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We introduced a methodology to efficiently exploit natural-language expressed biomedical knowledge for repurposing existing drugs towards diseases for which they were not initially intended. Leveraging on developments in Computational…

Quantitative Methods · Quantitative Biology 2014-06-17 Ruggero Gramatica , T. Di Matteo , Stefano Giorgetti , Massimo Barbiani , Dorian Bevec , Tomaso Aste

Probabilistic inferences distill knowledge from graphs to aid human make important decisions. Due to the inherent uncertainty in the model and the complexity of the knowledge, it is desirable to help the end-users understand the inference…

Social and Information Networks · Computer Science 2019-08-21 Chao Chen , Yifei Liu , Xi Zhang , Sihong Xie

This paper proposes a structure-aware driven scheduling graph modeling method to improve the accuracy and representation capability of anomaly identification in scheduling behaviors of complex systems. The method first designs a…

Machine Learning · Computer Science 2025-12-23 Ning Lyu , Junjie Jiang , Lu Chang , Chihui Shao , Feng Chen , Chong Zhang

The efficient and fair distribution of indivisible resources among agents is a common problem in the field of \emph{Multi-Agent-Systems}. We consider a graph-based version of this problem called Reachable Assignments, introduced by Gourves,…

Multiagent Systems · Computer Science 2020-05-06 Luis Müller , Matthias Bentert

A novel approach is put forth that utilizes data similarity, quantified on a graph, to improve upon the reconstruction performance of principal component analysis. The tasks of data dimensionality reduction and reconstruction are formulated…

Machine Learning · Statistics 2018-09-26 Ioannis D. Schizas

Nearest neighbor search is a fundamental data structure problem with many applications in machine learning, computer vision, recommendation systems and other fields. Although the main objective of the data structure is to quickly report…

Data Structures and Algorithms · Computer Science 2025-02-20 Piyush Anand , Piotr Indyk , Ravishankar Krishnaswamy , Sepideh Mahabadi , Vikas C. Raykar , Kirankumar Shiragur , Haike Xu

Several modern applications involve huge graphs and require fast answers to reachability queries. In more than two decades since first proposals, several approaches have been presented adopting on-line searches, hop labelling or transitive…

Data Structures and Algorithms · Computer Science 2016-11-09 Nicolas Boria , Gianpiero Cabodi , Paolo Camurati , Marco Palena , Paolo Pasini , Stefano Quer

With the rapidly growing demand of graph processing in the real scene, they have to efficiently handle massive concurrent jobs. Although existing work enable to efficiently handle single graph processing job, there are plenty of memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-05 Jin Zhao

We consider the problem of human-assisted graph search: given a directed acyclic graph with some (unknown) target node(s), we consider the problem of finding the target node(s) by asking an omniscient human questions of the form "Is there a…

Finding patterns in graphs is a fundamental problem in databases and data mining. In many applications, graphs are temporal and evolve over time, so we are interested in finding durable patterns, such as triangles and paths, which persist…

Databases · Computer Science 2024-03-26 Pankaj K. Agarwal , Xiao Hu , Stavros Sintos , Jun Yang

Autonomous robotic inspection, where a robot moves through its environment and inspects points of interest, has applications in industrial settings, structural health monitoring, and medicine. Planning the paths for a robot to safely and…

Graph-based representations such as Scene Graphs enable localization in structured indoor environments by matching a locally observed graph, constructed from sensor data, to a prior map. This process is particularly challenging in…

Emerging reconfigurable optical communication technologies allow to enhance datacenter topologies with demand-aware links optimized towards traffic patterns. This paper studies the algorithmic problem of jointly optimizing topology and…

Performance · Computer Science 2024-01-10 Wenkai Dai , Michael Dinitz , Klaus-Tycho Foerster , Long Luo , Stefan Schmid

This paper shows how to harness existing theorem provers for first-order logic to automatically verify safety properties of imperative programs that perform dynamic storage allocation and destructive updating of pointer-valued structure…

Logic in Computer Science · Computer Science 2015-07-01 Tal Lev-Ami , Neil Immerman , Thomas Reps , Mooly Sagiv , Siddharth Srivastava , Greta Yorsh

Graph path search is a classic computer science problem that has been recently approached with Reinforcement Learning (RL) due to its potential to outperform prior methods. Existing RL techniques typically assume a global view of the…

Machine Learning · Computer Science 2024-11-27 Alexei Pisacane , Victor-Alexandru Darvariu , Mirco Musolesi

With growing emphasis on privacy regulations, machine unlearning has become increasingly critical in real-world applications such as social networks and recommender systems, many of which are naturally represented as graphs. However,…

Machine Learning · Computer Science 2026-01-19 Ziheng Chen , Jiali Cheng , Hadi Amiri , Kaushiki Nag , Lu Lin , Sijia Liu , Xiangguo Sun , Gabriele Tolomei

Although Large Language Models (LLMs) have demonstrated potential in processing graphs, they struggle with comprehending graphical structure information through prompts of graph description sequences, especially as the graph size increases.…

Computation and Language · Computer Science 2024-12-17 Yukun Cao , Shuo Han , Zengyi Gao , Zezhong Ding , Xike Xie , S. Kevin Zhou

Read-only memory model is a classical model of computation to study time-space tradeoffs of algorithms. One of the classical results on the ROM model is that any sorting algorithm that uses O(s) words of extra space requires $\Omega…

Data Structures and Algorithms · Computer Science 2017-11-28 Sankardeep Chakraborty , Anish Mukherjee , Venkatesh Raman , Srinivasa Rao Satti

Majority of the existing graph neural networks (GNN) learn node embeddings that encode their local neighborhoods but not their positions. Consequently, two nodes that are vastly distant but located in similar local neighborhoods map to…

Social and Information Networks · Computer Science 2021-08-23 Sunil Nishad , Shubhangi Agarwal , Arnab Bhattacharya , Sayan Ranu

Graphs, consisting of vertices and edges, are vital for representing complex relationships in fields like social networks, finance, and blockchain. Visualizing these graphs helps analysts identify structural patterns, with readability…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-18 Sanggeon Yun