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The dynamics of energetic particle (EP) species, born from fusion reactions or plasma heating schemes, are critical for predicting the behavior of magnetic confinement fusion experiments and future fusion reactors. Because energetic…

Two of the most challenging tasks in molecular simulation consist in capturing the properties of systems with long-range interactions (e.g. electrolyte solutions) as well as systems containing large molecules such as hydrogels. For the…

Chemical Physics · Physics 2011-07-26 Jonathan Walter , Stephan Deublein , Steffen Reiser , Martin Horsch , Jadran Vrabec , Hans Hasse

This study proposes deterministic and stochastic energy-aware hybrid models that should enable simulations of idealized and primitive-equations Geophysical Fluid Dynamics (GFD) models at low resolutions without compromising on quality…

Fluid Dynamics · Physics 2024-05-27 Igor Shevchenko , Dan Crisan

Knowledge of the underlying mechanisms of multiphase flow dynamics in porous media is crucial for optimizing subsurface engineering applications like geological carbon sequestration. However, studying the micro-mechanisms of multiphase…

Fluid Dynamics · Physics 2025-08-01 Quanwei Dai , Kang Duan , Chung-Yee Kwok

In the analysis of composite materials with heterogeneous microstructures, full resolution of the heterogeneities using classical numerical approaches can be computationally prohibitive. This paper presents a micromechanics-enhanced finite…

Materials Science · Physics 2011-11-08 J. Novák , Ł. Kaczmarczyk , P. Grassl , J. Zeman , C. J. Pearce

Rigid bodies, plastic impact, persistent contact, Coulomb friction, and massless limbs are ubiquitous simplifications introduced to reduce the complexity of mechanics models despite the obvious physical inaccuracies that each incurs…

Robotics · Computer Science 2020-07-31 Aaron M. Johnson , Samuel A. Burden , Daniel E. Koditschek

A recently introduced particle-based model for fluid dynamics with continuous velocities is generalized to model immiscible binary mixtures. Excluded volume interactions between the two components are modeled by stochastic multiparticle…

Soft Condensed Matter · Physics 2015-05-13 Erkan Tuzel , Guoai Pan , Thomas Ihle , Daniel M. Kroll

Accurately learning the temporal behavior of dynamical systems requires models with well-chosen learning biases. Recent innovations embed the Hamiltonian and Lagrangian formalisms into neural networks and demonstrate a significant…

Machine Learning · Computer Science 2021-10-04 Shaan Desai , Marios Mattheakis , David Sondak , Pavlos Protopapas , Stephen Roberts

Port-Hamiltonian systems (pHS) allow for a structure-preserving modeling of dynamical systems. Coupling pHS via linear relations between input and output defines an overall pHS, which is structure preserving. However, in multiphysics…

Systems and Control · Electrical Eng. & Systems 2024-06-28 Peter Zaspel , Michael Günther

A basic model for describing plasma dynamics is given by the Euler-Maxwell system, in which compressible ion and electron fluids interact with their own self-consistent electromagnetic field. In this paper we consider the "one-fluid"…

Analysis of PDEs · Mathematics 2017-05-24 Yu Deng , Alexandru D. Ionescu , Benoit Pausader

This paper provides a first contribution to port-Hamiltonian modeling of district heating networks. By introducing a model hierarchy of flow equations on the network, this work aims at a thermodynamically consistent port-Hamiltonian…

In this contribution we present how to obtain explicit state space models in port-Hamiltonian form when a mixed finite element method is applied to a linear mechanical system with non-uniform boundary conditions. The key is to express the…

Systems and Control · Electrical Eng. & Systems 2021-11-01 Tobias Thoma , Paul Kotyczka

This paper presents a novel methodology for the direct numerical modeling and simulation of turbulent flows. The kinetic model equation is firstly extended to turbulent flow with the account of coupled evolution of kinetic, thermal, and…

Computational Physics · Physics 2025-03-11 Xiaojian Yang , Kun Xu

Biological cells are the prototypical example of active matter. Cells sense and respond to mechanical, chemical and electrical environmental stimuli with a range of behaviors, including dynamic changes in morphology and mechanical…

Computational Engineering, Finance, and Science · Computer Science 2017-02-28 Endre Somogyi , James A. Glazier

Port-Hamiltonian systems (PHS) theory is a recent but already well-established modelling approach for non-linear physical systems. Some studies have shown lately that PHS frameworks are relevant for modelling and control of swarm and…

Physics and Society · Physics 2023-01-09 Antoine Tordeux , Claudia Totzeck

In the quest to understand large-scale collective behavior in active matter, the complexity of hydrodynamic and phoretic interactions remains a fundamental challenge. To date, most works either focus on minimal models that do not (fully)…

Soft Condensed Matter · Physics 2026-01-06 Palash Bera , Aritra K. Mukhopadhyay , Benno Liebchen

We present a reduced magnetohydrodynamic (MHD) mathematical model describing the dynamical behavior of highly conducting plasmas with frozen-in magnetic fields, constrained by the assumption that, there exists a frame of reference, where…

Plasma Physics · Physics 2022-02-23 Igor V Sokolov , Lulu Zhao , Tamas I Gombosi

In this work we developed a mathematical model and a simulation platform for a fish-inspired robotic template, namely Magnetic, Modular, Undulatory Robotics ($\mu$Bots). Through this platform, we systematically explored the effects of…

Robotics · Computer Science 2021-11-11 Donghao Li , Hankun Deng , Yagiz E. Bayiz , Bo Cheng

The immersed boundary method is a mathematical formulation and numerical method for solving fluid-structure interaction problems. For many biological problems, such as models that include the cell membrane, the immersed structure is a…

Numerical Analysis · Mathematics 2018-06-07 Ondrej Maxian , Andrew T. Kassen , Wanda Strychalski

There are many interesting physical processes which involve the generation of high density plasmas in large volumes. However, when modeling these systems numerically, the large densities and volumes present a significant computational…

Computational Physics · Physics 2007-05-23 A. E. Schulz , A. D. Greenwood , K. L. Cartwright , P. J. Mardahl