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Jupyter has become the go-to platform for developing data applications but data and security concerns, especially when dealing with healthcare, have become paramount for many institutions and applications dealing with sensitive information.…

Cryptography and Security · Computer Science 2020-06-03 Haw-minn Lu , Adrian Kwong , Jose Unpingco

Background. Jupyter notebooks are one of the main tools used by data scientists. Notebooks include features (configuration scripts, markdown, images, etc.) that make them challenging to analyze compared to traditional software. As a result,…

Software Engineering · Computer Science 2025-07-28 Wenyuan Jiang , Diany Pressato , Harsh Darji , Thibaud Lutellier

Computational notebooks, such as Jupyter, have been widely adopted by data scientists to write code for analyzing and visualizing data. Despite their growing adoption and popularity, there has been no thorough study to understand Jupyter…

Context: Jupyter Notebook has emerged as a versatile tool that transforms how researchers, developers, and data scientists conduct and communicate their work. As the adoption of Jupyter notebooks continues to rise, so does the interest from…

Software Engineering · Computer Science 2026-01-06 Md Saeed Siddik , Hao Li , Cor-Paul Bezemer

Citing data and software is a means to give scholarly credit and to facilitate access to research objects. Citation principles encourage authors to provide full descriptions of objects, with stable links, in their papers. As Jupyter…

Digital Libraries · Computer Science 2020-04-28 Morgan F. Wofford , Bernadette M. Boscoe , Christine L. Borgman , Irene V. Pasquetto , Milena S. Golshan

Jupyter notebooks facilitate the bundling of executable code with its documentation and output in one interactive environment, and they represent a popular mechanism to document and share computational workflows. The reproducibility of…

Digital Libraries · Computer Science 2023-08-16 Sheeba Samuel , Daniel Mietchen

The way in which data are shared can affect their utility and reusability. Here, we demonstrate how data that we had previously shared in bulk can be mobilized further through a knowledge graph that allows for much more granular exploration…

Computational Engineering, Finance, and Science · Computer Science 2025-01-07 Sheeba Samuel , Daniel Mietchen

Jupyter Notebooks have become a mainstream tool for interactive computing in every field of science. Jupyter Notebooks are suitable as companion applications for Science Gateways, providing more flexibility and post-processing capability to…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-26 Andrea Zonca , Robert S. Sinkovits

As scientific work becomes more computational and data intensive, research processes and results become more difficult to interpret and reproduce. In this poster, we show how the Jupyter notebook, a tool originally designed as a free…

Digital Libraries · Computer Science 2018-04-17 Bernadette M. Boscoe , Irene V. Pasquetto , Milena S. Golshan , Christine L. Borgman

By bringing together code, text, and examples, Jupyter notebooks have become one of the most popular means to produce scientific results in a productive and reproducible way. As many of the notebook authors are experts in their scientific…

Software Engineering · Computer Science 2019-06-13 Jiawei Wang , Li Li , Andreas Zeller

Nowadays, numerous industries have exceptional demand for skills in data science, such as data analysis, data mining, and machine learning. The computational notebook (e.g., Jupyter Notebook) is a well-known data science tool adopted in…

Jupyter notebooks have become central in data science, integrating code, text and output in a flexible environment. With the rise of machine learning (ML), notebooks are increasingly used for prototyping and data analysis. However, due to…

Software Engineering · Computer Science 2025-08-12 Yiran Wang , Willem Meijer , José Antonio Hernández López , Ulf Nilsson , Dániel Varró

Jupyter Notebook is a popular tool among data analysts and scientists for working with data. It provides a way to combine code, documentation, and visualizations in a single, interactive environment, facilitating code reuse. While code…

Software Engineering · Computer Science 2023-02-24 Mingke Yang , Yuming Zhou , Bixin Li , Yutian Tang

Jupyter notebooks has emerged as a standard tool for data science programming. Programs in Jupyter notebooks are different from typical programs as they are constructed by a collection of code snippets interleaved with text and…

Software Engineering · Computer Science 2021-03-02 Malin Källén , Tobias Wrigstad

Interactive notebooks, such as Jupyter, have revolutionized the field of data science by providing an integrated environment for data, code, and documentation. However, their adoption by robotics researchers and model developers has been…

Computational Engineering, Finance, and Science · Computer Science 2024-05-15 Rolando Garcia

Reproducibility of computational studies is a hallmark of scientific methodology. It enables researchers to build with confidence on the methods and findings of others, reuse and extend computational pipelines, and thereby drive scientific…

Jupyter notebooks allow to bundle executable code with its documentation and output in one interactive environment, and they represent a popular mechanism to document and share computational workflows, including for research publications.…

Computational Engineering, Finance, and Science · Computer Science 2022-09-12 Sheeba Samuel , Daniel Mietchen

As access to the internet has become increasingly ubiquitous, along with the reliability and speed of internet providers, so too has the implementation of internet-based learning tools. These tools provide students opportunities to do…

Computers and Society · Computer Science 2024-09-20 Peter Berg , Zachary Kelly

Universities hold and process a vast amount of valuable user and research data. This makes them a prime target for cyber criminals. Additionally, universities and other educational settings, such as schools and college IT systems, have…

Cryptography and Security · Computer Science 2025-11-04 Harjinder Singh Lallie , Andrew Thompson , Elzbieta Titis , Paul Stephens

Open science initiatives seek to make research outputs more transparent, accessible, and reusable, but ensuring that published findings can be independently reproduced remains a persistent challenge. In this paper we describe an AI-driven…

Artificial Intelligence · Computer Science 2025-12-16 Adrien Bibal , Steven N. Minton , Deborah Khider , Yolanda Gil
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