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Dynamic program analysis (also known as profiling) is well-known for its powerful capabilities of identifying performance inefficiencies in software packages. Although a large number of dynamic program analysis techniques are developed in…

Software Engineering · Computer Science 2023-12-29 Qidong Zhao , Milind Chabbi , Xu Liu

Designing and developing web-enabled remote laboratories for pedagogical purposes is not an easy task. Often, developers (generally, educators who know the subjects they teach but lack of the technical and programming skills required to…

Systems and Control · Electrical Eng. & Systems 2024-02-12 Jesús Chacón , Hector Vargas , Gonzalo Farias , Jose Sánchez , Sebastián Dormido

Summary: heatmaply is an R package for easily creating interactive cluster heatmaps that can be shared online as a stand-alone HTML file. Interactivity includes a tooltip display of values when hovering over cells, as well as the ability to…

Quantitative Methods · Quantitative Biology 2019-11-07 Tal Galili , Alan OCallaghan , Jonathan Sidi , Carson Sievert

$\textbf{Motivation:}$ Hierarchical data structures are prevalent across several fields of research, as they represent an organised and efficient approach to study complex interconnected systems. Their significance is particularly evident…

Mathematical Software · Computer Science 2024-12-06 Giulio Benedetti , Ely Seraidarian , Theotime Pralas , Akewak Jeba , Tuomas Borman , Leo Lahti

In this paper we describe a hands-on laboratory oriented instructional package that we have developed for data communications and networking. The package consists of a software tool, together with instructional material for a laboratory…

Networking and Internet Architecture · Computer Science 2007-05-23 Rohit Goyal , Steve Lai , Raj Jain , Arian Durresi

Automated redesign without manual adjustments marks a key step forward in the design workflow. In this work, we focus on a foundational redesign task termed design layout editing, which seeks to autonomously modify the geometric composition…

Computer Vision and Pattern Recognition · Computer Science 2026-02-03 Jiawei Lin , Shizhao Sun , Danqing Huang , Ting Liu , Ji Li , Jiang Bian

The technological advancements of the modern era have enabled the collection of huge amounts of data in science and beyond. Extracting useful information from such massive datasets is an ongoing challenge as traditional data visualization…

Applications · Statistics 2017-01-30 Rebecca L Barter , Bin Yu

In recent years, programming has witnessed a shift towards using standard libraries as a black box. However, there has not been a synchronous development of tools that can help demonstrate the working of such libraries in general programs,…

Computers and Society · Computer Science 2021-01-29 Aman Bansal , Preey Shah , Sahil Shah

Computational notebooks, widely used for ad-hoc analysis and often shared with others, can be difficult to understand because the standard linear layout is not optimized for reading. In particular, related text, code, and outputs may be…

Human-Computer Interaction · Computer Science 2025-02-25 Yanna Lin , Leni Yang , Haotian Li , Huamin Qu , Dominik Moritz

We have developed (1) a graph visualization system that allows users to explore graphs by viewing them as a succession of spanning trees selected interactively, (2) a radial graph layout algorithm, and (3) an animation algorithm that…

Human-Computer Interaction · Computer Science 2007-05-23 Andrew Pavlo , Christopher Homan , Jonathan Schull

The R package MixMashNet provides an integrated framework for estimating and analyzing single and multilayer networks using Mixed Graphical Models (MGMs), accommodating continuous, count, and categorical variables. In the multilayer…

Graphic layout generation is a growing research area focusing on generating aesthetically pleasing layouts ranging from poster designs to documents. While recent research has explored ways to incorporate user constraints to guide the layout…

In recent years, Reinforcement Learning (RL), has become a popular field of study as well as a tool for enterprises working on cutting-edge artificial intelligence research. To this end, many researchers have built RL frameworks such as…

User simulation is a valuable methodology for evaluation in Information Retrieval (IR), enabling low-cost experimentation and counterfactual analysis. However, existing simulation frameworks are primarily code-centric libraries that require…

Information Retrieval · Computer Science 2026-04-28 Saber Zerhoudi , Adam Roegiest , Michael Granitzer

Network visualizations are commonly used to analyze relationships in various contexts. To efficiently explore a network visualization, the user needs to quickly navigate to different parts of the network and analyze local details. Recent…

Human-Computer Interaction · Computer Science 2023-03-29 Helen H. Huang , Hanspeter Pfister , Yalong Yang

Graphical models provide powerful tools to uncover complicated patterns in multivariate data and are commonly used in Bayesian statistics and machine learning. In this paper, we introduce the R package BDgraph which performs Bayesian…

Machine Learning · Statistics 2019-05-14 Reza Mohammadi , Ernst C. Wit

Many real-world networks, including social and information networks, are dynamic structures that evolve over time. Such dynamic networks are typically visualized using a sequence of static graph layouts. In addition to providing a visual…

Social and Information Networks · Computer Science 2014-01-21 Kevin S. Xu , Mark Kliger , Alfred O. Hero

IoT devices trigger real-time applications by receiving data from their vicinity. Modeling these applications in the form of workflows enables automating their procedure, especially for the business and industry. Depending on the features…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-15 Mohammad Amin Rayej , Hajar Siar , Ahmadreza Hamzei , Mohammad Sadegh Majidi Yazdi , Parsa Mohammadian , Mohammad Izadi

Recent years have witnessed the rise and success of pre-training techniques in visually-rich document understanding. However, most existing methods lack the systematic mining and utilization of layout-centered knowledge, leading to…

Computation and Language · Computer Science 2022-10-17 Qiming Peng , Yinxu Pan , Wenjin Wang , Bin Luo , Zhenyu Zhang , Zhengjie Huang , Teng Hu , Weichong Yin , Yongfeng Chen , Yin Zhang , Shikun Feng , Yu Sun , Hao Tian , Hua Wu , Haifeng Wang

Deep neural networks (DNNs) has shown great promise in computer vision tasks. However, machine vision achieved by DNNs cannot be as robust as human perception. Adversarial attacks and data distribution shifts have been known as two major…

Computer Vision and Pattern Recognition · Computer Science 2025-03-24 Xiaofeng Mao , Yuefeng Chen , Rong Zhang , Hui Xue , Zhao Li , Hang Su