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Localized contractile configurations or asters spontaneously appear and disappear as emergent structures in the collective stochastic dynamics of active polar actomyosin filaments. Passive parti- cles which (un)bind to the active filaments…

Soft Condensed Matter · Physics 2016-02-17 Amit Das , Anirban Polley , Madan Rao

The horizontal dynamics of a bouncing ball interacting with an irregular surface is investigated and is found to demonstrate behavior analogous to a random walk. Its stochastic character is substantiated by the calculation of a permutation…

Physics Education · Physics 2025-09-15 Luiz Antonio Barreiro

We consider a model system in which anomalous diffusion is generated by superposition of underlying linear modes with a broad range of relaxation times. In the language of Gaussian polymers, our model corresponds to Rouse (Fourier) modes…

Statistical Mechanics · Physics 2010-03-11 Assaf Amitai , Yacov Kantor , Mehran Kardar

We investigated the viscoelastic response of model interphase chromosomes by tracking the three-dimensional motion of hundreds of dispersed Brownian particles of sizes ranging from the thickness of the chromatin fiber up to slightly above…

Biomolecules · Quantitative Biology 2015-01-06 Manon Valet , Angelo Rosa

Many transport processes in nature exhibit anomalous diffusive properties with non-trivial scaling of the mean square displacement, e.g., diffusion of cells or of biomolecules inside the cell nucleus, where typically a crossover between…

Statistical Mechanics · Physics 2015-09-16 Andrea Cairoli , Adrian Baule

We study the influence of nonuniform motion of oscillators in a ring chain with nonlocal coupling on their collective dynamics and reveal the mechanism behind the emergence of an atypical chimera state in such systems. The mechanism relies…

Pattern Formation and Solitons · Physics 2025-12-02 Pavel A. Shcherbakov , Lev A. Smirnov , Vasily A. Kostin , Maxim I. Bolotov , Grigory V. Osipov

The non-equilibrium structural and dynamical properties of a flexible polymer tethered to a reflecting wall and subject to oscillatory linear flow are studied by numerical simulations. Polymer is confined in two dimensions and is modeled as…

Soft Condensed Matter · Physics 2024-07-30 A. Lamura

We examine the island size distribution function and spatial correlation function of a model for island growth in the submonolayer regime in both 1 and 2 dimensions. In our model the islands do not grow in shape, and a fixed number of…

Condensed Matter · Physics 2009-10-28 Ji Li , A. G. Rojo , Leonard M. Sander

We discuss simulations of a simple model for polymer blends in the framework of the Rouse model. At odds with standard predictions, large dynamic asymmetry between the two components induces strong non-exponentiality of the Rouse modes for…

Soft Condensed Matter · Physics 2009-11-13 Angel J. Moreno , Juan Colmenero

In this work we study a two-dimensional system composed by Active Brownian Particles (ABPs) interacting via a repulsive potential with two-length-scales, a soft shell and a hard-core. Depending on the ratio between the strength of the soft…

Soft Condensed Matter · Physics 2024-06-19 Jose Martin-Roca , Raul Martinez , Fernando Martinez-Pedrero , Jorge Ramirez , Chantal Valeriani

A nonequilibrium molecular dynamics computer simulation on microsegregated solutions of symmetrical diblock copolymers is reported. As the polymer concentration increases, the system undergoes phase transitions in the following order: body…

Soft Condensed Matter · Physics 2007-05-23 Igor Rychkov , Kenichi Yoshikawa

The diffusion behavior of an active Brownian particle (ABP) in polymer solutions is studied using Langevin dynamics simulations. We find that the long time diffusion coefficient $D$ can show a non-monotonic dependence on the particle size…

Soft Condensed Matter · Physics 2018-01-11 Yunfei Du , Zhonghuai Hou

We consider a rigid assembly of two active Brownian particles, forming an active colloidal dimer, in a gradient of activity. We show analytically that depending on the relative orientation of the two particles the active dimer accumulates…

Soft Condensed Matter · Physics 2022-08-17 Hidde D. Vuijk , Sophie Klempahn , Holger Merlitz , Jens-Uwe Sommer , Abhinav Sharma

Chemically-responsive polymers are macromolecules that respond to local variations of the chemical composition of the solution by changing their conformation, with notable examples including polyelectrolytes, proteins and DNA. The polymer…

Soft Condensed Matter · Physics 2022-07-27 Marco De Corato , Marino Arroyo

Polymer brush layers are responsive materials that swell in contact with good solvents and their vapors. We deposit drops of an almost completely wetting volatile oil onto an oleophilic polymer brush layer and follow the response of the…

Soft Condensed Matter · Physics 2023-08-11 Özlem Kap , Simon Hartmann , Harmen Hoek , Sissi de Beer , Igor Siretanu , Uwe Thiele , Frieder Mugele

We propose a simple phenomenological model for describing the conformational dynamics of biopolymers via the nonlinearity-induced buckling and collapse (i.e. coiling up) instabilities. Taking into account the coupling between the internal…

Soft Condensed Matter · Physics 2009-11-07 Serge F. Mingaleev , Yuri B. Gaididei , Peter L. Christiansen , Yuri S. Kivshar

Any first course on polymer physics teaches that the dynamics of a tagged monomer of a polymer is anomalously subdiffusive, i.e., the mean-square displacement of a tagged monomer increases as $t^\alpha$ for some $\alpha<1$ until the…

Soft Condensed Matter · Physics 2010-06-16 Debabrata Panja

The interaction of polymers with small-scale velocity gradients can trigger a coil-stretch transition in the polymers. We analyze this transition within a direct numerical simulation of shear turbulence with an Oldroyd-B model for the…

Chaotic Dynamics · Physics 2009-11-07 Bruno Eckhardt , Jochen Kronjaeger , Joerg Schumacher

We present an extensive numerical study of dynamical heterogeneities and their influence on diffusion in an athermal mesoscopic model for actively deformed amorphous solids. At low strain rates the stress dynamics are governed by…

Materials Science · Physics 2011-11-04 Kirsten Martens , Lyderic Bocquet , Jean-Louis Barrat

The non-equilibrium structural and dynamical properties of a semiflexible polymer confined in a cylindrical microchannel and exposed to a Poiseuille flow is studied by mesoscale hydrodynamic simulations. For a polymer with a length half of…

Soft Condensed Matter · Physics 2010-08-09 Raghunath Chelakkot , Roland. G. Winkler , Gerhard Gompper