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Unlike widely used Named Entity Recognition (NER) data sets in generic domains, biomedical NER data sets often contain mentions consisting of discontinuous spans. Conventional sequence tagging techniques encode Markov assumptions that are…

Computation and Language · Computer Science 2020-04-29 Xiang Dai , Sarvnaz Karimi , Ben Hachey , Cecile Paris

Audio tagging aims at predicting sound events occurred in a recording. Traditional models require enormous laborious annotations, otherwise performance degeneration will be the norm. Therefore, we investigate robust audio tagging models in…

Sound · Computer Science 2021-10-05 Zhiling Zhang , Zelin Zhou , Haifeng Tang , Guangwei Li , Mengyue Wu , Kenny Q. Zhu

Recently, the task of distantly supervised (DS) ultra-fine entity typing has received significant attention. However, DS data is noisy and often suffers from missing or wrong labeling issues resulting in low precision and low recall. This…

Computation and Language · Computer Science 2022-10-19 Yue Zhang , Hongliang Fei , Ping Li

Named entity recognition (NER) remains challenging when entity mentions can be discontinuous. Existing methods break the recognition process into several sequential steps. In training, they predict conditioned on the golden intermediate…

Computation and Language · Computer Science 2021-11-29 Yucheng Wang , Bowen Yu , Hongsong Zhu , Tingwen Liu , Nan Yu , Limin Sun

In biomedical fields, one named entity may consist of a series of non-adjacent tokens and overlap with other entities. Previous methods recognize discontinuous entities by connecting entity fragments or internal tokens, which face…

Computation and Language · Computer Science 2025-10-14 Yawen Yang , Fukun Ma , Shiao Meng , Aiwei Liu , Lijie Wen

Named entity recognition often fails in idiosyncratic domains. That causes a problem for depending tasks, such as entity linking and relation extraction. We propose a generic and robust approach for high-recall named entity recognition. Our…

Computation and Language · Computer Science 2016-08-25 Sebastian Arnold , Felix A. Gers , Torsten Kilias , Alexander Löser

When an entity name contains other names within it, the identification of all combinations of names can become difficult and expensive. We propose a new method to recognize not only outermost named entities but also inner nested ones. We…

Computation and Language · Computer Science 2020-07-13 Takashi Shibuya , Eduard Hovy

Automatically locating named entities in natural language text - named entity recognition - is an important task in the biomedical domain. Many named entity mentions are ambiguous between several bioconcept types, however, causing text…

Computation and Language · Computer Science 2019-09-24 Chih-Hsuan Wei , Kyubum Lee , Robert Leaman , Zhiyong Lu

Environmental audio tagging is a newly proposed task to predict the presence or absence of a specific audio event in a chunk. Deep neural network (DNN) based methods have been successfully adopted for predicting the audio tags in the…

Sound · Computer Science 2017-02-28 Yong Xu , Qiuqiang Kong , Qiang Huang , Wenwu Wang , Mark D. Plumbley

Recent advances in deep neural models allow us to build reliable named entity recognition (NER) systems without handcrafting features. However, such methods require large amounts of manually-labeled training data. There have been efforts on…

Computation and Language · Computer Science 2018-09-12 Jingbo Shang , Liyuan Liu , Xiang Ren , Xiaotao Gu , Teng Ren , Jiawei Han

We present a general framework based on weighted finite automata and weighted finite-state transducers for describing and implementing speech recognizers. The framework allows us to represent uniformly the information sources and data…

cmp-lg · Computer Science 2008-02-03 Fernando C. N. Pereira , Michael D. Riley

Biomedical entity linking is the task of identifying mentions of biomedical concepts in text documents and mapping them to canonical entities in a target thesaurus. Recent advancements in entity linking using BERT-based models follow a…

Computation and Language · Computer Science 2021-03-10 Rajarshi Bhowmik , Karl Stratos , Gerard de Melo

Deep neural models for named entity recognition (NER) have shown impressive results in overcoming label scarcity and generalizing to unseen entities by leveraging distant supervision and auxiliary information such as explanations. However,…

Fine-grained entity typing (FET) aims to assign proper semantic types to entity mentions according to their context, which is a fundamental task in various entity-leveraging applications. Current FET systems usually establish on large-scale…

Computation and Language · Computer Science 2022-05-11 Weiran Pan , Wei Wei , Feida Zhu

Named entity recognition (NER) identifies typed entity mentions in raw text. While the task is well-established, there is no universally used tagset: often, datasets are annotated for use in downstream applications and accordingly only…

Computation and Language · Computer Science 2019-10-08 Xiao Huang , Li Dong , Elizabeth Boschee , Nanyun Peng

We introduce a new entity typing task: given a sentence with an entity mention, the goal is to predict a set of free-form phrases (e.g. skyscraper, songwriter, or criminal) that describe appropriate types for the target entity. This…

Computation and Language · Computer Science 2018-07-16 Eunsol Choi , Omer Levy , Yejin Choi , Luke Zettlemoyer

Distantly supervised named entity recognition (DS-NER) has emerged as a cheap and convenient alternative to traditional human annotation methods, enabling the automatic generation of training data by aligning text with external resources.…

Computation and Language · Computer Science 2025-05-20 Yuyang Ding , Dan Qiao , Juntao Li , Jiajie Xu , Pingfu Chao , Xiaofang Zhou , Min Zhang

Fine-grained entity typing aims to assign entity mentions in the free text with types arranged in a hierarchical structure. Traditional distant supervision based methods employ a structured data source as a weak supervision and do not need…

Computation and Language · Computer Science 2018-01-10 Denghui Zhang , Pengshan Cai , Yantao Jia , Manling Li , Yuanzhuo Wang , Xueqi Cheng

We describe a named entity tagging system that requires minimal linguistic knowledge and can be applied to more target languages without substantial changes. The system is based on the ideas of the Brill's tagger which makes it really…

Computation and Language · Computer Science 2020-06-23 Diego Alexander Huérfano Villalba , Elizabeth León Guzmán

In this paper, we proposed a deep learning-based end-to-end method on the domain specified automatic term extraction (ATE), it considers possible term spans within a fixed length in the sentence and predicts them whether they can be…

Computation and Language · Computer Science 2019-09-10 Yuze Gao , Yu Yuan
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