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We study information theoretic methods for ranking biomarkers. In clinical trials there are two, closely related, types of biomarkers: predictive and prognostic, and disentangling them is a key challenge. Our first step is to phrase…

Machine Learning · Statistics 2016-12-06 Konstantinos Sechidis , Emily Turner , Paul D. Metcalfe , James Weatherall , Gavin Brown

The adoption of heterogeneous computing systems based on diverse architectures to achieve exascale computing power has worsened the performance portability problem of scientific applications that were designed to run on these platforms. To…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-10-17 Ami Marowka

We propose performance profiles-distribution functions for a performance metric-as a tool for benchmarking and comparing optimization software. We show that performance profiles combine the best features of other tools for performance…

Mathematical Software · Computer Science 2007-05-23 Elizabeth D. Dolan , Jorge J. Moré

Dynamic Algorithm Configuration (DAC) aims to dynamically control a target algorithm's hyperparameters in order to improve its performance. Several theoretical and empirical results have demonstrated the benefits of dynamically controlling…

Artificial Intelligence · Computer Science 2021-12-07 Theresa Eimer , André Biedenkapp , Maximilian Reimer , Steven Adriaensen , Frank Hutter , Marius Lindauer

Benchmarking, standards and certification are closely related processes. Standards can provide normative requirements that robotics and AI systems may or may not conform to. Certification generally relies upon conformance with one or more…

Robotics · Computer Science 2023-09-22 Alan F. T. Winfield , Matthew Studley

Scientific research communities are embracing AI-based solutions to target tractable scientific tasks and improve research workflows. However, the development and evaluation of such solutions are scattered across multiple disciplines. We…

Artificial Intelligence · Computer Science 2022-06-14 Yatao Li , Jianfeng Zhan

This paper highlights the need to bring document classification benchmarking closer to real-world applications, both in the nature of data tested ($X$: multi-channel, multi-paged, multi-industry; $Y$: class distributions and label set…

Computer Vision and Pattern Recognition · Computer Science 2023-11-01 Jordy Van Landeghem , Sanket Biswas , Matthew B. Blaschko , Marie-Francine Moens

Machine learning research depends on objectively interpretable, comparable, and reproducible algorithm benchmarks. We advocate the use of curated, comprehensive suites of machine learning tasks to standardize the setup, execution, and…

We present a novel approach for constructing discrete optimization benchmarks that enables fine-grained control over problem properties, and such benchmarks can facilitate analyzing discrete algorithm behaviors. We build benchmark problems…

Neural and Evolutionary Computing · Computer Science 2026-04-09 Furong Ye , Frank Neumann , Thomas Bäck , Niki van Stein

Many platforms for benchmarking optimization algorithms offer users the possibility of sharing their experimental data with the purpose of promoting reproducible and reusable research. However, different platforms use different data models…

Neural and Evolutionary Computing · Computer Science 2021-04-27 Ana Kostovska , Diederick Vermetten , Carola Doerr , Sašo Džeroski , Panče Panov , Tome Eftimov

We increasingly depend on a variety of data-driven algorithmic systems to assist us in many aspects of life. Search engines and recommender systems amongst others are used as sources of information and to help us in making all sort of…

Databases · Computer Science 2021-09-01 Evaggelia Pitoura , Kostas Stefanidis , Georgia Koutrika

Large-scale key-value storage systems sacrifice consistency in the interest of dependability (i.e., partition tolerance and availability), as well as performance (i.e., latency). Such systems provide eventual consistency,which---to this…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-11-21 Muntasir Raihan Rahman , Wojciech Golab , Alvin AuYoung , Kimberly Keeton , Jay J. Wylie

Accurate parsing of citations is necessary for machine-readable scholarly infrastructure. But, despite sustained interest in this problem, existing evaluation techniques are often not generalizable, based on synthetic data, or not publicly…

Digital Libraries · Computer Science 2026-03-27 Parth Sarin , Juan Pablo Alperin , Adam Buttrick , Dione Mentis

Recent studies have shown that the majority of published computational models in systems biology and physiology are not repeatable or reproducible. There are a variety of reasons for this. One of the most likely reasons is that given how…

Other Quantitative Biology · Quantitative Biology 2021-07-13 Herbert M. Sauro

Benchmarking is commonly used in research fields, such as computer architecture design and machine learning, as a powerful paradigm for rigorously assessing, comparing, and developing novel technologies. However, the data centre networking…

Networking and Internet Architecture · Computer Science 2022-08-26 Christopher W. F. Parsonson , Joshua L. Benjamin , Georgios Zervas

Advances in AI, and especially machine learning, are increasingly drawing research interest and efforts towards predictive process monitoring, the subfield of process mining (PM) that concerns predicting next events, process outcomes and…

Artificial Intelligence · Computer Science 2021-07-06 Hans Weytjens , Jochen De Weerdt

Benchmarking is an important tool for assessing the relative performance of alternative solving approaches. However, the utility of benchmarking is limited by the quantity and quality of the available problem instances. Modern constraint…

Artificial Intelligence · Computer Science 2025-06-11 Nguyen Dang , Özgür Akgün , Joan Espasa , Ian Miguel , Peter Nightingale

A novel reinforcement learning benchmark, called Industrial Benchmark, is introduced. The Industrial Benchmark aims at being be realistic in the sense, that it includes a variety of aspects that we found to be vital in industrial…

Machine Learning · Computer Science 2017-09-29 Daniel Hein , Alexander Hentschel , Volkmar Sterzing , Michel Tokic , Steffen Udluft

We present a framework that utilizes quantum algorithms, an architecture aware quantum noise model and an ideal simulator to benchmark quantum computers. The benchmark metrics highlight the difference between the quantum computer evolution…

Quantum Physics · Physics 2021-12-20 Konstantinos Georgopoulos , Clive Emary , Paolo Zuliani

In response to algorithmic unfairness embedded in sociotechnical systems, significant attention has been focused on the contents of machine learning datasets which have revealed biases towards white, cisgender, male, and Western data…

Computers and Society · Computer Science 2024-03-14 Remi Denton , Alex Hanna , Razvan Amironesei , Andrew Smart , Hilary Nicole , Morgan Klaus Scheuerman