English
Related papers

Related papers: Fast and Small Subsampled R-indexes

200 papers

We consider document listing on string collections, that is, finding in which strings a given pattern appears. In particular, we focus on repetitive collections: a collection of size $N$ over alphabet $[1,\sigma]$ is composed of $D$ copies…

Data Structures and Algorithms · Computer Science 2018-11-15 Gonzalo Navarro

The well-known dictionary-based algorithms of the Lempel-Ziv (LZ) 77 family are the basis of several universal lossless compression techniques. These algorithms are asymmetric regarding encoding/decoding time and memory requirements, with…

Data Structures and Algorithms · Computer Science 2009-12-31 Artur Ferreira , Arlindo Oliveira , Mario Figueiredo

We consider the problem of recursively and causally reconstructing time sequences of sparse signals (with unknown and time-varying sparsity patterns) from a limited number of noisy linear measurements. The sparsity pattern is assumed to…

Information Theory · Computer Science 2010-07-28 Namrata Vaswani

Let $S_{T}(k)$ denote the set of distinct substrings of length $k$ in a string $T$, then the $k$-th substring complexity is defined by its cardinality $|S_{T}(k)|$. Recently, $\delta = \max \{ |S_{T}(k)| / k : k \ge 1 \}$ is shown to be a…

Data Structures and Algorithms · Computer Science 2022-05-26 Akiyoshi Kawamoto , Tomohiro I

Document listing on string collections is the task of finding all documents where a pattern appears. It is regarded as the most fundamental document retrieval problem, and is useful in various applications. Many of the fastest-growing…

Data Structures and Algorithms · Computer Science 2019-02-21 Dustin Cobas , Gonzalo Navarro

For a text given in advance, the substring minimal suffix queries ask to determine the lexicographically minimal non-empty suffix of a substring specified by the location of its occurrence in the text. We develop a data structure answering…

Data Structures and Algorithms · Computer Science 2016-02-01 Tomasz Kociumaka

Deploying massive large language models (LLMs) as continuous cognitive engines for robotics is bottlenecked by the time-to-first-token (TTFT) latency required to process extensive state histories. Existing solutions like RAG or sliding…

Robotics · Computer Science 2026-05-11 Robin Karlsson , Go Suzui

Many large-scale systems rely on high-quality deep representations (embeddings) to facilitate tasks like retrieval, search, and generative modeling. Matryoshka Representation Learning (MRL) recently emerged as a solution for adaptive…

Machine Learning · Computer Science 2025-05-21 Tiansheng Wen , Yifei Wang , Zequn Zeng , Zhong Peng , Yudi Su , Xinyang Liu , Bo Chen , Hongwei Liu , Stefanie Jegelka , Chenyu You

Sparse structures are widely recognized and utilized in channel estimation. Two typical mechanisms, namely proportionate updating (PU) and zero-attracting (ZA) techniques, achieve better performance, but their computational complexity are…

Signal Processing · Electrical Eng. & Systems 2023-05-08 Zhen Qin

BERT based ranking models have achieved superior performance on various information retrieval tasks. However, the large number of parameters and complex self-attention operation come at a significant latency overhead. To remedy this, recent…

Information Retrieval · Computer Science 2021-10-06 Nachshon Cohen , Amit Portnoy , Besnik Fetahu , Amir Ingber

Given a set of pattern strings $\mathcal{P}=\{P_1, P_2,\ldots P_k\}$ and a text string $S$, the classic dictionary matching problem is to report all occurrences of each pattern in $S$. We study the dictionary problem in the compressed…

Data Structures and Algorithms · Computer Science 2025-09-04 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

Compressed sensing (CS) is a new signal acquisition paradigm that enables the reconstruction of signals and images from a low number of samples. A particularly exciting application of CS is Magnetic Resonance Imaging (MRI), where CS…

Information Theory · Computer Science 2016-08-17 Samuel Birns , Bohyun Kim , Stephanie Ku , Kevin Stangl , Deanna Needell

Retrieving documents and prepending them in-context at inference time improves performance of language model (LMs) on a wide range of tasks. However, these documents, often spanning hundreds of words, make inference substantially more…

Computation and Language · Computer Science 2023-10-09 Fangyuan Xu , Weijia Shi , Eunsol Choi

In this paper, we propose a new \emph{dynamic compressed index} of $O(w)$ space for a dynamic text $T$, where $w = O(\min(z \log N \log^*M, N))$ is the size of the signature encoding of $T$, $z$ is the size of the Lempel-Ziv77 (LZ77)…

Data Structures and Algorithms · Computer Science 2016-07-20 Takaaki Nishimoto , Tomohiro I , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Long-context agentic workflows have emerged as a defining use case for large language models, making attention efficiency critical for both inference speed and serving cost. Sparse attention addresses this challenge effectively, and…

Computation and Language · Computer Science 2026-03-13 Yushi Bai , Qian Dong , Ting Jiang , Xin Lv , Zhengxiao Du , Aohan Zeng , Jie Tang , Juanzi Li

Suffix tree (and the closely related suffix array) are fundamental structures capturing all substrings of a given text essentially by storing all its suffixes in the lexicographical order. In some applications, we work with a subset of $b$…

Data Structures and Algorithms · Computer Science 2016-08-03 Paweł Gawrychowski , Tomasz Kociumaka

Temporal search aims to identify a minimal set of relevant frames from tens of thousands based on a given query, serving as a foundation for accurate long-form video understanding. Existing works attempt to progressively narrow the search…

Computer Vision and Pattern Recognition · Computer Science 2025-11-10 Junwen Pan , Qizhe Zhang , Rui Zhang , Ming Lu , Xin Wan , Yuan Zhang , Chang Liu , Qi She

In this work, we present a literature review for full-text and keyword indexes as well as our contributions (which are mostly practice-oriented). The first contribution is the FM-bloated index, which is a modification of the well-known…

Data Structures and Algorithms · Computer Science 2015-08-27 Aleksander Cisłak

We introduce the first grammar-compressed representation of a sequence that supports searches in time that depends only logarithmically on the size of the grammar. Given a text $T[1..u]$ that is represented by a (context-free) grammar of…

Data Structures and Algorithms · Computer Science 2011-10-21 Francisco Claude , Gonzalo Navarro

Similarity search is a fundamental operation for analyzing data series (DS), which are ordered sequences of real values. To enhance efficiency, summarization techniques are employed that reduce the dimensionality of DS. SAX-based approaches…

Databases · Computer Science 2024-12-04 Patrick Schäfer , Jakob Brand , Ulf Leser , Botao Peng , Themis Palpanas