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Purpose: Magnetic Resonance Imaging (MRI) enables non-invasive assessment of brain abnormalities during early life development. Permanent magnet scanners operating in the neonatal intensive care unit (NICU) facilitate MRI of sick infants,…

Image and Video Processing · Electrical Eng. & Systems 2025-05-23 Yamin Arefeen , Brett Levac , Bhairav Patel , Chang Ho , Jonathan I. Tamir

Brain extraction is a fundamental step for most brain imaging studies. In this paper, we investigate the problem of skull stripping and propose complementary segmentation networks (CompNets) to accurately extract the brain from T1-weighted…

Computer Vision and Pattern Recognition · Computer Science 2018-10-11 Raunak Dey , Yi Hong

Reverberation results in reduced intelligibility for both normal and hearing-impaired listeners. This paper presents a novel psychoacoustic approach of dereverberation of a single speech source by recycling a pre-trained binaural anechoic…

Audio and Speech Processing · Electrical Eng. & Systems 2022-08-10 Sania Gul , Muhammad Salman Khan , Syed Waqar Shah , Ata Ur-Rehman

We present several deep learning models for assessing the morphometric fidelity of deep grey matter region models extracted from brain MRI. We test three different convolutional neural net architectures (VGGNet, ResNet and Inception) over…

Efficient and accurate whole-brain lesion segmentation remains a challenge in medical image analysis. In this work, we revisit MeshNet, a parameter-efficient segmentation model, and introduce a novel multi-scale dilation pattern with an…

Image and Video Processing · Electrical Eng. & Systems 2025-03-10 Alex Fedorov , Yutong Bu , Xiao Hu , Chris Rorden , Sergey Plis

Seizure type identification is essential for the treatment and management of epileptic patients. However, it is a difficult process known to be time consuming and labor intensive. Automated diagnosis systems, with the advancement of machine…

Signal Processing · Electrical Eng. & Systems 2023-03-09 Hezam Albaqami , Ghulam Mubashar Hassan , Amitava Datta

A learning-based posterior distribution estimation method, Probabilistic Dipole Inversion (PDI), is proposed to solve quantitative susceptibility mapping (QSM) inverse problem in MRI with uncertainty estimation. A deep convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2020-04-28 Jinwei Zhang , Hang Zhang , Mert Sabuncu , Pascal Spincemaille , Thanh Nguyen , Yi Wang

In this paper we propose an efficient deep learning encoder-decoder network for performing Harmonic-Percussive Source Separation (HPSS). It is shown that we are able to greatly reduce the number of model trainable parameters by using a…

Sound · Computer Science 2019-07-31 Carlos Lordelo , Emmanouil Benetos , Simon Dixon , Sven Ahlbäck

Although existing deep learning compressed-sensing-based Magnetic Resonance Imaging (CS-MRI) methods have achieved considerably impressive performance, explainability and generalizability continue to be challenging for such methods since…

Image and Video Processing · Electrical Eng. & Systems 2023-03-14 Xiaohong Fan , Yin Yang , Ke Chen , Jianping Zhang , Ke Dong

Magnetic resonance imaging (MRI) is an essential diagnostic tool that suffers from prolonged scan times. Reconstruction methods can alleviate this limitation by recovering clinically usable images from accelerated acquisitions. In…

Image and Video Processing · Electrical Eng. & Systems 2023-01-09 Salman UH Dar , Şaban Öztürk , Muzaffer Özbey , Tolga Çukur

Currently, MRI-only radiotherapy (RT) eliminates some of the concerns about using CT images in RT chains such as the registration of MR images to a separate CT, extra dose delivery, and the additional cost of repeated imaging. However, one…

Medical Physics · Physics 2021-03-03 Faeze Gholamiankhah , Samaneh Mostafapour , Hossein Arabi

Most traditional algorithms for compressive sensing image reconstruction suffer from the intensive computation. Recently, deep learning-based reconstruction algorithms have been reported, which dramatically reduce the time complexity than…

Computer Vision and Pattern Recognition · Computer Science 2019-09-05 Hantao Yao , Feng Dai , Dongming Zhang , Yike Ma , Shiliang Zhang , Yongdong Zhang , Qi Tian

Purpose: Magnetic Resonance Spectroscopic Imaging (MRSI) maps endogenous brain metabolism while suppressing the overwhelming water signal. Water-unsuppressed MRSI (wu-MRSI) allows simultaneous imaging of water and metabolites, but large…

Image and Video Processing · Electrical Eng. & Systems 2025-12-18 Paul J. Weiser , Jiye Kim , Jongho Lee , Amirmohammad Shamaei , Gulnur Ungan , Malte Hoffmann , Antoine Klauser , Berkin Bilgic , Ovidiu C. Andronesi

Inverse scattering problems are critical in electromagnetic imaging and medical diagnostics but are challenged by their nonlinearity and diverse measurement scenarios. This paper proposes a physics-informed deep contrast source inversion…

Computational Physics · Physics 2025-08-15 Haoran Sun , Daoqi Liu , Hongyu Zhou , Maokun Li , Shenheng Xu , Fan Yang

Since upcoming telescopes will observe thousands of strong lensing systems, creating fully-automated analysis pipelines for these images becomes increasingly important. In this work, we make a step towards that direction by developing the…

Cosmology and Nongalactic Astrophysics · Physics 2020-06-03 Marco Chianese , Adam Coogan , Paul Hofma , Sydney Otten , Christoph Weniger

Quantitative susceptibility maps from magnetic resonance images can provide both prognostic and diagnostic information in multiple sclerosis, a neurodegenerative disease characterized by the formation of lesions in white matter brain…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Alexandra G. Roberts , Ha M. Luu , Mert Şişman , Alexey V. Dimov , Ceren Tozlu , Ilhami Kovanlikaya , Susan A. Gauthier , Thanh D. Nguyen , Yi Wang

To date, several methods have been developed to explain deep learning algorithms for classification tasks. Recently, an adaptation of two of such methods has been proposed to generate instance-level explainable maps in a semantic…

In this paper, a novel approach for single channel source separation (SCSS) using a deep neural network (DNN) architecture is introduced. Unlike previous studies in which DNN and other classifiers were used for classifying time-frequency…

Neural and Evolutionary Computing · Computer Science 2013-11-13 Emad M. Grais , Mehmet Umut Sen , Hakan Erdogan

This paper addresses the problem of semi-supervised transfer learning with limited cross-modality data in remote sensing. A large amount of multi-modal earth observation images, such as multispectral imagery (MSI) or synthetic aperture…

Computer Vision and Pattern Recognition · Computer Science 2020-07-14 Danfeng Hong , Naoto Yokoya , Gui-Song Xia , Jocelyn Chanussot , Xiao Xiang Zhu

Deep neural networks have become an indispensable technique for audio source separation (ASS). It was recently reported that a variant of CNN architecture called MMDenseNet was successfully employed to solve the ASS problem of estimating…

Sound · Computer Science 2018-05-30 Naoya Takahashi , Nabarun Goswami , Yuki Mitsufuji