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The third autoPET challenge introduced a new data-centric task this year, shifting the focus from model development to improving metastatic lesion segmentation on PET/CT images through data quality and handling strategies. In response, we…

Image and Video Processing · Electrical Eng. & Systems 2024-09-17 Balint Kovacs , Shuhan Xiao , Maximilian Rokuss , Constantin Ulrich , Fabian Isensee , Klaus H. Maier-Hein

Accurate lesion segmentation in whole-body PET/CT scans is crucial for cancer diagnosis and treatment planning, but limited datasets often hinder the performance of automated segmentation models. In this paper, we explore the potential of…

Image and Video Processing · Electrical Eng. & Systems 2024-09-13 Lap Yan Lennon Chan , Chenxin Li , Yixuan Yuan

Lesion segmentation in PET/CT imaging is essential for precise tumor characterization, which supports personalized treatment planning and enhances diagnostic precision in oncology. However, accurate manual segmentation of lesions is…

Image and Video Processing · Electrical Eng. & Systems 2024-09-19 Hamza Kalisch , Fabian Hörst , Ken Herrmann , Jens Kleesiek , Constantin Seibold

The escalating global cancer burden underscores the critical need for precise diagnostic tools in oncology. This research employs deep learning to enhance lesion segmentation in PET/CT imaging, utilizing a dataset of 900 whole-body…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Jiayi Liu , Qiaoyi Xue , Youdan Feng , Tianming Xu , Kaixin Shen , Chuyun Shen , Yuhang Shi

The great success of deep learning heavily relies on increasingly larger training data, which comes at a price of huge computational and infrastructural costs. This poses crucial questions that, do all training data contribute to model's…

Machine Learning · Computer Science 2023-02-28 Shuo Yang , Zeke Xie , Hanyu Peng , Min Xu , Mingming Sun , Ping Li

This study presents FP-PET, a comprehensive approach to medical image segmentation with a focus on CT and PET images. Utilizing a dataset from the AutoPet2023 Challenge, the research employs a variety of machine learning models, including…

Computer Vision and Pattern Recognition · Computer Science 2023-09-25 Yixin Chen , Ourui Fu , Wenrui Shao , Zhaoheng Xie

This paper seeks to address the dense labeling problems where a significant fraction of the dataset can be pruned without sacrificing much accuracy. We observe that, on standard medical image segmentation benchmarks, the loss gradient…

Computer Vision and Pattern Recognition · Computer Science 2023-08-03 Yongkang He , Mingjin Chen , Zhijing Yang , Yongyi Lu

The automatic segmentation of pathological regions within whole-body PET-CT volumes has the potential to streamline various clinical applications such as diagno-sis, prognosis, and treatment planning. This study aims to address this…

Image and Video Processing · Electrical Eng. & Systems 2024-09-24 Mehdi Astaraki , Simone Bendazzoli

Automated lesion segmentation in PET/CT scans is crucial for improving clinical workflows and advancing cancer diagnostics. However, the task is challenging due to physiological variability, different tracers used in PET imaging, and…

Image and Video Processing · Electrical Eng. & Systems 2024-10-22 Maximilian Rokuss , Balint Kovacs , Yannick Kirchhoff , Shuhan Xiao , Constantin Ulrich , Klaus H. Maier-Hein , Fabian Isensee

Machine learning models can fail on subgroups that are underrepresented during training. While techniques such as dataset balancing can improve performance on underperforming groups, they require access to training group annotations and can…

Machine Learning · Computer Science 2024-06-25 Saachi Jain , Kimia Hamidieh , Kristian Georgiev , Andrew Ilyas , Marzyeh Ghassemi , Aleksander Madry

In this study, we implemented a two-stage deep learning-based approach to segment lesions in PET/CT images for the AutoPET III challenge. The first stage utilized a DynUNet model for coarse segmentation, identifying broad regions of…

Image and Video Processing · Electrical Eng. & Systems 2024-09-23 Reza Safdari , Mohammad Koohi-Moghaddam , Kyongtae Tyler Bae

In machine learning, incorporating more data is often seen as a reliable strategy for improving model performance; this work challenges that notion by demonstrating that the addition of external datasets in many cases can hurt the resulting…

Machine Learning · Computer Science 2023-08-09 Rhys Compton , Lily Zhang , Aahlad Puli , Rajesh Ranganath

Automated segmentation of cancerous lesions in PET/CT scans is a crucial first step in quantitative image analysis. However, training deep learning models for segmentation with high accuracy is particularly challenging due to the variations…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Shadab Ahamed

Transformer-based language models have shown state-of-the-art performance on a variety of natural language understanding tasks. To achieve this performance, these models are first pre-trained on general corpus and then fine-tuned on…

Computation and Language · Computer Science 2024-07-15 Mohammadreza Tayaranian , Seyyed Hasan Mozafari , Brett H. Meyer , James J. Clark , Warren J. Gross

Automatic segmentation of tumor lesions is a critical initial processing step for quantitative PET/CT analysis. However, numerous tumor lesions with different shapes, sizes, and uptake intensity may be distributed in different anatomical…

Image and Video Processing · Electrical Eng. & Systems 2022-09-20 Zhantao Liu , Shaonan Zhong , Junyang Mo

Deep learning models learn to fit training data while they are highly expected to generalize well to testing data. Most works aim at finding such models by creatively designing architectures and fine-tuning parameters. To adapt to…

Computer Vision and Pattern Recognition · Computer Science 2018-09-10 Tianyang Wang , Jun Huan , Bo Li

Real world datasets contain incorrectly labeled instances that hamper the performance of the model and, in particular, the ability to generalize out of distribution. Also, each example might have different contribution towards learning.…

In this paper, we study a simple and generic framework to tackle the problem of learning model parameters when a fraction of the training samples are corrupted. We first make a simple observation: in a variety of such settings, the…

Machine Learning · Computer Science 2019-02-20 Yanyao Shen , Sujay Sanghavi

Recently, pre-trained language models (LMs) have achieved strong performance when fine-tuned on difficult benchmarks like SuperGLUE. However, performance can suffer when there are very few labeled examples available for fine-tuning. Pattern…

Computation and Language · Computer Science 2021-09-29 Derek Tam , Rakesh R Menon , Mohit Bansal , Shashank Srivastava , Colin Raffel
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