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In this paper, we review a method for computing and parameterizing the set of homotopy classes of chain maps between two chain complexes. This is then applied to finding topologically meaningful maps between simplicial complexes, which in…

Computational Geometry · Computer Science 2011-08-18 Andrew Tausz , Gunnar Carlsson

We develop a tropical analogue of the classical double description method allowing one to compute an internal representation (in terms of vertices) of a polyhedron defined externally (by inequalities). The heart of the tropical algorithm is…

Computational Geometry · Computer Science 2011-12-30 Xavier Allamigeon , Stephane Gaubert , Eric Goubault

Synthesis problems for linkages in kinematics often yield large structured parameterized polynomial systems which generically have far fewer solutions than traditional upper bounds would suggest. This paper describes statistical models for…

Robotics · Computer Science 2020-10-05 Jonathan D. Hauenstein , Samantha N. Sherman

We study an ancient problem that in a static or dynamical system, sought an optimal path, which the context always means within an extremal condition. In fact, through those discussions about this theme, we established a universal essential…

Data Structures and Algorithms · Computer Science 2016-02-09 Yong Tan

Numerical algebraic geometry provides a number of efficient tools for approximating the solutions of polynomial systems. One such tool is the parameter homotopy, which can be an extremely efficient method to solve numerous polynomial…

Algebraic Geometry · Mathematics 2018-04-13 Daniel J. Bates , Danielle Brake , Matthew Niemerg

We apply methods of tropical optimization to handle problems of rating alternatives on the basis of the log-Chebyshev approximation of pairwise comparison matrices. We derive a direct solution in a closed form, and investigate the obtained…

Optimization and Control · Mathematics 2017-08-15 Nikolai Krivulin

Polynomial systems occur in many fields of science and engineering. Polynomial homotopy continuation methods apply symbolic-numeric algorithms to solve polynomial systems. We describe the design and implementation of our web interface and…

Mathematical Software · Computer Science 2015-06-09 Nathan Bliss , Jeff Sommars , Jan Verschelde , Xiangcheng Yu

We study some basic algorithmic problems concerning the intersection of tropical hypersurfaces in general dimension: deciding whether this intersection is nonempty, whether it is a tropical variety, and whether it is connected, as well as…

Combinatorics · Mathematics 2007-05-23 Thorsten Theobald

An algorithm to give an explicit description of all the solutions to any tropical linear system $A\odot x=B\odot x$ is presented. The given system is converted into a finite (rather small) number $p$ of pairs $(S,T)$ of classical linear…

Rings and Algebras · Mathematics 2011-01-24 E. Lorenzo , M. J. de la Puente

The problem of solving tropical linear systems, a natural problem of tropical mathematics, has already proven to be very interesting from the algorithmic point of view: it is known to be in $NP\cap coNP$ but no polynomial time algorithm is…

Computational Complexity · Computer Science 2013-09-23 Alex Davydow

We consider multidimensional optimization problems, which are formulated and solved in terms of tropical mathematics. The problems are to minimize (maximize) a linear or nonlinear function defined on vectors over an idempotent semifield,…

Optimization and Control · Mathematics 2024-01-18 N. Krivulin

The tropical semiring is an algebraic system with addition ``$\max$'' and multiplication ``$+$''. As well as in conventional algebra, linear programming in the tropical semiring has been developed. In this study, we introduce a new type of…

Optimization and Control · Mathematics 2026-02-03 Yuki Nishida

Tropical mathematics redefines the rules of arithmetic by replacing addition with taking a maximum, and by replacing multiplication with addition. After briefly discussing a tropical version of linear algebra, we study polynomials build…

Algebraic Geometry · Mathematics 2019-08-21 Ralph Morrison

We discuss a novel analysis method for reaction network systems with polynomial or rational rate functions. This method is based on computing tropical equilibrations defined by the equality of at least two dominant monomials of opposite…

Molecular Networks · Quantitative Biology 2015-08-25 Satya Swarup Samal , Dima Grigoriev , Holger Fröhlich , Ovidiu Radulescu

The goal of this paper is to provide computational tools able to find a solution of a system of polynomial inequalities. The set of inequalities is reformulated as a system of polynomial equations. Three different methods, two of which…

Dynamical Systems · Mathematics 2016-03-04 Laura Menini , Corrado Possieri , Antonio Tornambè

We exhibit a class of classical or tropical posynomial systems which can be solved by reduction to linear or convex programming problems. This relies on a notion of colorful vectors with respect to a collection of Newton polytopes. This…

Optimization and Control · Mathematics 2020-05-15 Marianne Akian , Xavier Allamigeon , Marin Boyet , Stéphane Gaubert

Systems biology uses large networks of biochemical reactions to model the functioning of biological cells from the molecular to the cellular scale. The dynamics of dissipative reaction networks with many well separated time scales can be…

Molecular Networks · Quantitative Biology 2013-05-28 Vincent Noel , Dima Grigoriev , Sergei Vakulenko , Ovidiu Radulescu

For a wide variety of regularization methods, algorithms computing the entire solution path have been developed recently. Solution path algorithms do not only compute the solution for one particular value of the regularization parameter but…

Machine Learning · Computer Science 2009-03-30 Bernd Gärtner , Joachim Giesen , Martin Jaggi , Torsten Welsch

A path tracking algorithm that adaptively adjusts precision is presented. By adjusting the level of precision in accordance with the numerical conditioning of the path, the algorithm achieves high reliability with less computational cost…

Numerical Analysis · Mathematics 2007-05-23 Daniel J. Bates , Andrew J. Sommese , Charles W. Wampler

We apply methods and techniques of tropical optimization to develop a new theoretical and computational framework for the implementation of the Analytic Hierarchy Process in multi-criteria problems of rating alternatives from pairwise…

Optimization and Control · Mathematics 2018-02-01 N. Krivulin , S. Sergeev