Related papers: Universal partial tori
We study the cycle structure of words in several random permutations. We assume that the permutations are independent and that their distribution is conjugation invariant, with a good control on their short cycles. If, after successive…
A T-net of order $m$ is a graph with $m$ nodes and $2m$ directed edges, where every node has indegree and outdegree equal to $2$. (A well known example of T-nets are de Bruijn graphs.) Given a T-net $N$ of order $m$, there is the so called…
A subspace of the space, L(n), of traceless complex $n\times n$ matrices can be specified by requiring that the entries at some positions $(i,j)$ be zero. The set, $I$, of these positions is a (zero) pattern and the corresponding subspace…
We decide completely the cycle structure of pure summing register (PSR) and complementary summing register (CSR). Based on the state diagram of CSR, we derive an algorithm to generate de Bruijn cycles from CSR inspired by Tuvi Etzion's…
A word on $q$ symbols is a sequence of letters from a fixed alphabet of size $q$. For an integer $k\ge 1$, we say that a word $w$ is $k$-universal if, given an arbitrary word of length $k$, one can obtain it by removing entries from $w$. It…
Given a string $T$ on an alphabet of size $\sigma$, we describe a bidirectional Burrows-Wheeler index that takes $O(|T|\log{\sigma})$ bits of space, and that supports the addition \emph{and removal} of one character, on the left or right…
Two finite words are k-binomially equivalent if each subword (i.e., subsequence) of length at most k occurs the same number of times in both words. The k-binomial complexity of an infinite word is a function that maps the integer $n\geq 0$…
The graph of overlapping permutations is defined in a way analogous to the De Bruijn graph on strings of symbols. That is, for every permutation $\pi = \pi_{1} \pi_{2} ... \pi_{n+1}$ there is a directed edge from the standardization of…
We introduce an algorithm for the uniform generation of infinite traces, i.e., infinite words up to commutation of some letters. The algorithm outputs on-the-fly approximations of a theoretical infinite trace, the latter being distributed…
In this paper, we consider partially commutative metabelian Lie algebras whose defining graphs are cycles. We show that such algebras are universally equivalent iff the corresponding cycles have the same length. Moreover, we give an example…
The discrepancy of a binary string is the maximum (absolute) difference between the number of ones and the number of zeroes over all possible substrings of the given binary string. In this note we determine the minimal discrepancy that a…
We propose a construction of de Bruijn sequences by the cycle joining method from linear feedback shift registers (LFSRs) with arbitrary characteristic polynomial $f(x)$. We study in detail the cycle structure of the set $\Omega(f(x))$ that…
Completely antipersistent binary time series are sequences in which every time that an $N$-bit string $\mu$ appears, the sequence is continued with a different bit than at the last occurrence of $\mu$. This dynamics is phrased in terms of a…
The paired de Bruijn graph is an extension of de Bruijn graph incorporating mate pair information for genome assembly proposed by Mevdedev et al. However, unlike in an ordinary de Bruijn graph, not every path or cycle in a paired de Bruijn…
We suggest a new point of view on de Bruijn graphs and their subgraphs based on using circular words rather than linear ones.
A $k$-uniform tight cycle is a $k$-graph with a cyclic order of its vertices such that every $k$ consecutive vertices from an edge. We show that for $k\geq 3$, every red-blue edge-coloured complete $k$-graph on $n$ vertices contains $k$…
A word is level if each letter appears in it the same number of times, plus or minus 1. We give a complete characterization of the lengths for which level ternary circular square-free words exist. Key words: combinatorics on words, circular…
In this short note, we first associate a new simple undirected graph with a given word over an ordered alphabet of $n$-letters. We will call it the Lyndon graph of that word. Then, we introduce the concept of the Lyndon-word representable…
The focus of this work is to show how to combine Zech's logarithms and each of the cycle joining and cross-join pairing methods to construct binary de Bruijn sequences of any order. A basic implementation is supplied as a proof-of-concept.…
Given a countable set X (usually taken to be N or Z), an infinite permutation $\pi$ of X is a linear ordering $<_\pi$ of X. This paper investigates the combinatorial complexity of infinite permutations on N associated with the image of…