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This study examined code issue detection and revision automation by integrating Large Language Models (LLMs) such as OpenAI's GPT-3.5 Turbo and GPT-4o into software development workflows. A static code analysis framework detects issues such…

Software Engineering · Computer Science 2025-06-13 Seyed Moein Abtahi , Akramul Azim

Phenotype-driven gene prioritization is a critical process in the diagnosis of rare genetic disorders for identifying and ranking potential disease-causing genes based on observed physical traits or phenotypes. While traditional approaches…

Quantitative Methods · Quantitative Biology 2024-04-04 Junyoung Kim , Jingye Yang , Kai Wang , Chunhua Weng , Cong Liu

Large Language Models (LLMs) are trained on massive amounts of data, enabling their application across diverse domains and tasks. Despite their remarkable performance, most LLMs are developed and evaluated primarily in English. Recently, a…

Computation and Language · Computer Science 2024-10-18 Krishno Dey , Prerona Tarannum , Md. Arid Hasan , Imran Razzak , Usman Naseem

Large Language Models (LLMs) have demonstrated remarkable success in various natural language processing and software engineering tasks, such as code generation. The LLMs are mainly utilized in the prompt-based zero/few-shot paradigm to…

Software Engineering · Computer Science 2024-01-31 Mohamad Khajezade , Jie JW Wu , Fatemeh Hendijani Fard , Gema Rodríguez-Pérez , Mohamed Sami Shehata

In the rapidly evolving field of natural language processing, the translation of linguistic descriptions into mathematical formulation of optimization problems presents a formidable challenge, demanding intricate understanding and…

Computation and Language · Computer Science 2024-03-05 Tasnim Ahmed , Salimur Choudhury

Making errors is part of the programming process -- even for the most seasoned professionals. Novices in particular are bound to make many errors while learning. It is well known that traditional (compiler/interpreter) programming error…

Software Engineering · Computer Science 2025-01-13 Audrey Salmon , Katie Hammer , Eddie Antonio Santos , Brett A. Becker

In today's world, the focus of programmers has shifted from writing complex, error-prone code to prioritizing simple, clear, efficient, and sustainable code that makes programs easier to understand. Code refactoring plays a critical role in…

Software Engineering · Computer Science 2025-12-01 Md. Raihan Tapader , Md. Mostafizer Rahman , Ariful Islam Shiplu , Md Faizul Ibne Amin , Yutaka Watanobe

Large Language Models (LLMs) have the potential to revolutionize automated traceability by overcoming the challenges faced by previous methods and introducing new possibilities. However, the optimal utilization of LLMs for automated…

Software Engineering · Computer Science 2023-08-02 Alberto D. Rodriguez , Katherine R. Dearstyne , Jane Cleland-Huang

Context: Code reviews are crucial for software quality. Recent AI advances have allowed large language models (LLMs) to review and fix code; now, there are tools that perform these reviews. However, their reliability and accuracy have not…

Software Engineering · Computer Science 2025-05-27 Umut Cihan , Arda İçöz , Vahid Haratian , Eray Tüzün

Background: Log messages provide valuable information about the status of software systems. This information is provided in an unstructured fashion and automated approaches are applied to extract relevant parameters. To ease this process,…

Software Engineering · Computer Science 2024-09-05 Merve Astekin , Max Hort , Leon Moonen

There is a growing concern about the environmental impact of large language models (LLMs) in software development, particularly due to their high energy use and carbon footprint. Small Language Models (SLMs) offer a more sustainable…

Software Engineering · Computer Science 2025-10-08 Humza Ashraf , Syed Muhammad Danish , Shadikur Rahman , Zeeshan Sattar

Large language models (LLMs) have revolutionized zero-shot task performance, mitigating the need for task-specific annotations while enhancing task generalizability. Despite its advancements, current methods using trigger phrases such as…

Computation and Language · Computer Science 2024-06-13 Saurabh Srivastava , Chengyue Huang , Weiguo Fan , Ziyu Yao

We propose a novel three-step prompt-tuning method for Bengali Grammatical Error Explanation (BGEE) using state-of-the-art large language models (LLMs) such as GPT-4, GPT-3.5 Turbo, and Llama-2-70b. Our approach involves identifying and…

Computation and Language · Computer Science 2025-04-09 Subhankar Maity , Aniket Deroy

Large language models (LLMs) have demonstrated remarkable capabilities in natural language understanding, reasoning, and problem-solving across various domains. However, their ability to perform complex, multi-step reasoning task-essential…

Large Language Models (LLMs) for code generation evolve rapidly through fine-tuning, merging, or new model releases. However, such updates can introduce regressions, not only in correctness but also in code quality and performance. To…

Software Engineering · Computer Science 2025-07-28 Altaf Allah Abbassi , Leuson Da Silva , Amin Nikanjam , Foutse Khomh

Test smells indicate poor development practices in test code, reducing maintainability and reliability. While developers often struggle to prevent or refactor these issues, existing tools focus primarily on detection rather than automated…

Large language models (LLMs) have behaved well in generating unit tests for Java projects. However, the performance for covering the complex focal methods within the projects is poor. Complex methods comprise many conditions and loops,…

Software Engineering · Computer Science 2024-08-22 Zejun Wang , Kaibo Liu , Ge Li , Zhi Jin

Large language models (LLMs) have demonstrated significant potential in code generation tasks. However, there remains a performance gap between open-source and closed-source models. To address this gap, existing approaches typically…

Computation and Language · Computer Science 2025-04-18 Weijie Lv , Xuan Xia , Sheng-Jun Huang

Recent advancements in Large Language Models (LLMs) have led to their widespread application in automated code generation. However, these models can still generate defective code that deviates from the specification. Previous research has…

Software Engineering · Computer Science 2025-03-21 QiHong Chen , Jiachen Yu , Jiawei Li , Jiecheng Deng , Justin Tian Jin Chen , Iftekhar Ahmed

Command injection vulnerabilities are a significant security threat in dynamic languages like Python, particularly in widely used open-source projects where security issues can have extensive impact. With the proven effectiveness of Large…

Software Engineering · Computer Science 2025-05-22 Yuxuan Wang , Jingshu Chen , Qingyang Wang
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